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SCNpilot_cont_1000_p_scaffold_803_10

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 10 / 38
Location: comp(12031..12774)

Top 3 Functional Annotations

Value Algorithm Source
Sex pilus assembly and mating pair formation protein id=4756827 bin=GWC2_Alphaproteobacteria_42_16 species=Cupriavidus metallidurans genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 231.0
  • Bit_score: 190
  • Evalue 2.80e-45
type-F conjugative transfer system pilin assembly protein TrbC; K12059 conjugal transfer pilus assembly protein TrbC similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 124.0
  • Bit_score: 74
  • Evalue 7.00e-11
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 231.0
  • Bit_score: 190
  • Evalue 3.90e-45

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
TTGTTGTGCGATTTAGCCGAACGAATTTGTCATGTGTTTTTTCTTATTATTGGCGCAAGTCCTGTGCTTGTAAGCCATGCTTTTTCTCAAACCTCTGAGATACAAACACTTCAAAAAGACTCATTAAAAAAGGTTGAAACTCTGCTCAATGATAAAGGGTTCAAGGATGTTATTTCTAACTTAGAAACTAAAGCTTCCTGTTCGGTAAAAGACTTATCCTTTGGAACGATTTCAAAATCAGAAGGTTCCTTTTCATTAGAGAGTCAGCTCGAAAGCTCCTCATGTTTTTCTTTTCCTTCTTCCCACCTACAGGAGAATAAAATTATTTCAGAGACCCAATTTTATATCTTTGTCTCCCTTTCTTTAGAGGAGAAAGCCCTTTTAAACCTTGCAATTGATGCTAAGCGATATGGGGCTACGCTTGTCTTAAGGGGGTTTATTAATGGAAGCTATGTTGAAACAGCAAAAGCCTTGCAGAAAATTATCCAAGAAGCGGATCAAGGCTTCATTATTGACCCTGAGCTTTTTACCCTTTTTAGTATTACAGCTGTTCCTACATTTATCCTCGCCAAACCTTTCCAATTGAATACCTTAGAGCGAATCCAAACACCACTCCATGATCGTATCCAGGGGCATATCAGTGCTCAATATGCTTTGGAAACGTTTGCTAAAGAGGGAAGTCTCTCTGAGGAAGCCAAAGTTCTTTTAGCTAAATCTCCTTTGGGGAAAGGAGAGTTAAAATGA
PROTEIN sequence
Length: 248
LLCDLAERICHVFFLIIGASPVLVSHAFSQTSEIQTLQKDSLKKVETLLNDKGFKDVISNLETKASCSVKDLSFGTISKSEGSFSLESQLESSSCFSFPSSHLQENKIISETQFYIFVSLSLEEKALLNLAIDAKRYGATLVLRGFINGSYVETAKALQKIIQEADQGFIIDPELFTLFSITAVPTFILAKPFQLNTLERIQTPLHDRIQGHISAQYALETFAKEGSLSEEAKVLLAKSPLGKGELK*