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SCNpilot_cont_1000_p_scaffold_950_6

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 10 / 38
Location: comp(4854..5402)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway protease TraF-like protein id=4756797 bin=GWC2_Alphaproteobacteria_42_16 species=endosymbiont of Riftia pachyptila genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 155.0
  • Bit_score: 144
  • Evalue 7.60e-32
conjugative transfer signal peptidase TraF; K12062 conjugal transfer pilin signal peptidase TrbI similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 121.0
  • Bit_score: 69
  • Evalue 9.80e-10
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 155.0
  • Bit_score: 144
  • Evalue 1.10e-31

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGTGAAAAGCCTTTCCTCGAAACCAATAAAAGCCCAGCTAGGAAGAATAGTTTCTTAGACATGGTCATAATTCTTTTAACTCTCACTCTTATGCTGTGGGTCATAAGTACGCGGACTCATCTATATGAATGCGGTTCAGAGAGCTTACAAGGCGTACGGTATATCTTGGCCATAAATCGCCTCACTCTTAAGCGAGGGGACATTGTTTCCATCTCTGGGCACGACACAGCTTATGTTCGAGGAAAAACCCTTGCCAAAAAGCTGATTGGCCTTCCTGGAGATGTGATTGAGCAAACCTATAAGGGTATCCTTGTCTCACAAATTTTTAATGGGCGCCAACAAATCAAAATTCCTCTTACGTCAACACTTCCCTTTCTTGAAAAAACCATAGATGGGAAAGTGCTAACACCCATTACTGCAACCATTGTTCCGGAAGGATACGTTTTTGTCTCGGGAGATCACCCTCGGAGTTTTGATTCCCGGTATGAAGAGTTTGGCCTTGTGCCTATGGAGAGGATATGGGGAAAGGCGGTGCTTTGGTGGTAA
PROTEIN sequence
Length: 183
MSEKPFLETNKSPARKNSFLDMVIILLTLTLMLWVISTRTHLYECGSESLQGVRYILAINRLTLKRGDIVSISGHDTAYVRGKTLAKKLIGLPGDVIEQTYKGILVSQIFNGRQQIKIPLTSTLPFLEKTIDGKVLTPITATIVPEGYVFVSGDHPRSFDSRYEEFGLVPMERIWGKAVLWW*