ggKbase home page

SCNpilot_cont_1000_p_scaffold_1079_10

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 10 / 38
Location: comp(10167..10832)

Top 3 Functional Annotations

Value Algorithm Source
conjugative transfer protein TrbC n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACE8 similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 195.0
  • Bit_score: 87
  • Evalue 1.80e-14
Uncharacterized protein {ECO:0000313|EMBL:AIL12616.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 127.0
  • Bit_score: 109
  • Evalue 4.60e-21
trbC; conjugative transfer protein TrbC; K12059 conjugal transfer pilus assembly protein TrbC similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 126.0
  • Bit_score: 76
  • Evalue 9.70e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGCTGCCTCCTATAATCTTTACTCATTTAATGCTCGTAGGCTTTATATTAAGCACCTTCGCTGAGGCGAAAAATCAAGATTTAGATTCGAATCACTCTTGGATCAGAGAGTTGACCCACCAAGCAGATACGCTCTCTAAAACCCATCAGAAAGAAGCCAGATCGATTGTGGAGGGAGCTACAAGAGCAGTGCACCAAAACAAATCTTGTAAAGTGGCACAAACCCTTGCCCAACGTGGGAATGAAATCGTACTCAAAACCTTACAGCCAAGTGAGGATGAAGCCCGTTATCCAAGACTGCTCGTCTTTGTCTCCTTTTCTATGCCTCTACAGGCACTCAAAGCTTTAGGGGCTCAAGTTAATGCTGTGGGTGGAAAGCTTGTTTTAAGAGGCTTGGTTGGGGGGAATTTTAAAAAGACTGCTGAAAAACTTAAAGAACTTCAGGAAGAAATTATCATCGATCCTACCTTGTTTGAGGATTATGTCATTTCAGCGGTCCCTACTTTTGTTTTAAGAAATGAAAGCCCAAAAAAAGCTGAAGACAATTCATACGATCGCTTAACAGGAAACGTTTCTCTCAGATATGCATTGGAGCAGTTTGCATCGAAGGGAAATACCTCTCAAGAAGCTGGTCTATTGCTGGAGAATCTCAGGAGGCTTCCATGA
PROTEIN sequence
Length: 222
MLPPIIFTHLMLVGFILSTFAEAKNQDLDSNHSWIRELTHQADTLSKTHQKEARSIVEGATRAVHQNKSCKVAQTLAQRGNEIVLKTLQPSEDEARYPRLLVFVSFSMPLQALKALGAQVNAVGGKLVLRGLVGGNFKKTAEKLKELQEEIIIDPTLFEDYVISAVPTFVLRNESPKKAEDNSYDRLTGNVSLRYALEQFASKGNTSQEAGLLLENLRRLP*