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SCNpilot_cont_1000_p_scaffold_1079_13

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 10 / 38
Location: comp(12444..13055)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway protease TraF-like protein id=4756797 bin=GWC2_Alphaproteobacteria_42_16 species=endosymbiont of Riftia pachyptila genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 159.0
  • Bit_score: 87
  • Evalue 1.20e-14
traF; F pilus assembly protein traF; K12062 conjugal transfer pilin signal peptidase TrbI similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 162.0
  • Bit_score: 82
  • Evalue 2.10e-13
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 37.7
  • Coverage: 159.0
  • Bit_score: 87
  • Evalue 1.70e-14

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGAGGGGCACTTCTATCGATAGGATTTATAGAGTTTTTCATGTGCTTTGGAATAGTTCGACTGTTGGAATCGTAGGCTTAGGAATGATTTTGAGTGTTGTTCTCACTCAAACCCGCCTCTATATCAATTACACGCCGTCGTTGCCCTACAAAGCCTTTATCTGCATTAAAGGGTTGACCCCACACTATAATGATTTTGTGAGCATTCATGATCATCCAACCCATTTCTTCAAAGGACTTCATTTGATAAAACGGCTGGTTGGTTTTCCAGGAGATCACGTTCATATTTATCATAACCATCTCTATATTGAAAAAACGCAAACTCGTCTTCTTATTGATACCCATCATATTGGACCTTTGCATCAAACAACTCAAGATGGAAAAATCCTCCATCCCCTTAAAGATACTATCATTCCAAAAAATTATGTGTTTGTCAGTGCAGACCATCCTCGTTCCTTTGATTCTCGCTATGAAGAGTTTGGGCTCGTCAAAGAGGAGTGCATTACCGGCAGGTGTTTTTGTCTCTTACCCCTCCCAGTTATCAGTCATCAGTTATCAGTAATCGGAAAGGTTTCTTTATCTGAAAAACAGAGAATGAAAGGTGAGAAATGA
PROTEIN sequence
Length: 204
MRGTSIDRIYRVFHVLWNSSTVGIVGLGMILSVVLTQTRLYINYTPSLPYKAFICIKGLTPHYNDFVSIHDHPTHFFKGLHLIKRLVGFPGDHVHIYHNHLYIEKTQTRLLIDTHHIGPLHQTTQDGKILHPLKDTIIPKNYVFVSADHPRSFDSRYEEFGLVKEECITGRCFCLLPLPVISHQLSVIGKVSLSEKQRMKGEK*