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SCNpilot_cont_1000_p_scaffold_745_25

Organism: SCNPILOT_CONT_1000_P_Amoebophilus_asiaticus_42_9_0

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(37363..38226)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU52_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 287.0
  • Bit_score: 537
  • Evalue 6.40e-150
  • rbh
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 287.0
  • Bit_score: 537
  • Evalue 2.00e-150
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACE05471.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 287.0
  • Bit_score: 537
  • Evalue 8.90e-150

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Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGAGACAGCTCAAAATAAGTAAGCAAATTACGAATCGTGAAAGCCAGTCATTGGATAAATATCTTCAAGAGATAGGTAGAGTAGATCTACTGACTCCAGAAGAGGAAGTAGAACTTGCTAAACGTATTAAATCAGGAGATAAAGCTGCCTTGGAGCAACTGACTAAAGCTAACTTACGTTTCGTAGTATCTGTGGCTAAACAGTACCAAAATCAGGGTTTATCATTGAGTGACTTAATCAACGAAGGGAACCTAGGCCTCATTAAATCAGCCCAACGTTTTGATGAGACAAGGGGATTTAAATTTATCTCTTACGCTGTATGGTGGATCAGGCAATCTATCTTACAAGCTTTAGCCGAACAGTCTCGTATCGTGCGTTTGCCGCTAAACAGGGTGGGTACACTGAACAAATTATCTAGAACATTCTCTCAACTTGAACAAAAGTTTAAACGTGAGCCAACCGCCGAAGAGCTTGCCGAAGAGCTAGAGGTCACAGCCAGTGAAGTAAGTGATACCATGAAAATATCTGGGCGCCATGTTTCTGTGGATGCTCCCTTTGTACAAGGGGAAGAACACAGCTTGTTAGATGTCTTGGAGGATGATGACGAAGATAAACCTGATGATACACTGATTGATGAATCTTTATGTAAAGATATAGAGCGAGCATTGTCTTTACTTACTGACAGGGAAGCTGGGGTAGTTAGTTATTATTTTGGATTGCGCGGAACGAACCCCATGACCTTAGAAGAAATAGGCACTAGGTTTAATTTGACACGTGAACGCGTAAGGCAGATTAAAGAAAAGGCCATTAAAAAATTACGTCAGGTAGCAACTAGCAAGACGCTCAAAAATTACCTAGGATAG
PROTEIN sequence
Length: 288
MRQLKISKQITNRESQSLDKYLQEIGRVDLLTPEEEVELAKRIKSGDKAALEQLTKANLRFVVSVAKQYQNQGLSLSDLINEGNLGLIKSAQRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNRVGTLNKLSRTFSQLEQKFKREPTAEELAEELEVTASEVSDTMKISGRHVSVDAPFVQGEEHSLLDVLEDDDEDKPDDTLIDESLCKDIERALSLLTDREAGVVSYYFGLRGTNPMTLEEIGTRFNLTRERVRQIKEKAIKKLRQVATSKTLKNYLG*