name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_2210_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..686)
----------------- DNA (684bp) protein (228aa) |
Uracil-DNA glycosylase, family 5 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTG3_9PROT
rbh
SPO1 DNA polymerase {ECO:0000313|EMBL:KIO49138.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2210_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
751..1317
----------------- DNA (567bp) protein (189aa) |
Elongation factor P n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=EFP_NITMU
rbh
translation elongation factor P; K02356 elongation factor P
rbh
Elongation factor P {ECO:0000255|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000255|HAMAP-Rule:MF_00141};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_cont_1000_p_scaffold_2210_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1366..2688)
----------------- DNA (1323bp) protein (441aa) |
Phosphate-selective porin O and P n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9K1_NITMU
rbh
Porin {ECO:0000313|EMBL:KIO49223.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
phosphate-selective porin O and P; K07221 phosphate-selective porin OprO and OprP
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2210_4
unknown
|
Not on your lists |
3513..3887
----------------- DNA (375bp) protein (125aa) |
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_2210_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4030..4755
----------------- DNA (726bp) protein (242aa) |
Kazal-type serine protease inhibitor domain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLD1_9PROT
Kazal-type serine protease inhibitor domain {ECO:0000313|EMBL:CCU63473.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
proteinase inhibitor I1, Kazal
|
|
SCNpilot_cont_1000_p_scaffold_2210_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4773..5216)
----------------- DNA (444bp) protein (148aa) |
Response regulator receiver protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T5V3_METSL
Chemotaxis protein CheY {ECO:0000313|EMBL:KIO49142.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
response regulator receiver protein
|
|
SCNpilot_cont_1000_p_scaffold_2210_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5257..6660)
----------------- DNA (1404bp) protein (468aa) |
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Putative two-component histidine kinase sensor protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M4_HERAR
rbh
two-component histidine kinase sensor protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2210_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7077..7979)
----------------- DNA (903bp) protein (301aa) |
Putative membrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF30_9PROT
rbh
Membrane protein {ECO:0000313|EMBL:KIO47861.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K15270 S-adenosylmethionine uptake transporter
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2210_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8169..8981
----------------- DNA (813bp) protein (271aa) |
GntR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003778817
rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KIO48397.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2210_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9021..10778
----------------- DNA (1758bp) protein (586aa) |
frdA; putative reductase (alkanesulfonate metabolism) (EC:1.3.99.1)
rbh
Putative reductase (Alkanesulfonate metabolism) n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AH84_COLFT
rbh
Oxidoreductase {ECO:0000313|EMBL:KIO48396.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_p_scaffold_2210_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10801..11034
----------------- DNA (234bp) protein (78aa) |
4Fe-4S ferredoxin n=1 Tax=Variovorax paradoxus RepID=UPI000372E74A
4Fe-4S ferredoxin {ECO:0000313|EMBL:KIO48395.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ferredoxin
|
|
SCNpilot_cont_1000_p_scaffold_2210_12
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11077..12510
----------------- DNA (1434bp) protein (478aa) |
nitrate ABC transporter substrate-binding protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0003145663
nitrate ABC transporter periplasmic nitrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
Nitrate ABC transporter, periplasmic nitrate-binding protein, putative {ECO:0000313|EMBL:AEK62492.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
|
|
SCNpilot_cont_1000_p_scaffold_2210_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12562..13395
----------------- DNA (834bp) protein (278aa) |
ABC transporter permease n=1 Tax=Herbaspirillum lusitanum RepID=UPI000382C7BC
ABC transporter permease {ECO:0000313|EMBL:KIO48529.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein
|
|
SCNpilot_cont_1000_p_scaffold_2210_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13392..14261
----------------- DNA (870bp) protein (290aa) |
ssuB; putative sulfate ABC transporter ATPase (EC:3.6.3.36); K02049 NitT/TauT family transport system ATP-binding protein
rbh
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000368031E
rbh
Sulfonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIO48394.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_p_scaffold_2210_15
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14263..15261
----------------- DNA (999bp) protein (333aa) |
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003805709
rbh
Uncharacterized protein {ECO:0000313|EMBL:ELX12851.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
HEAT repeat protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2210_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15308..15604
----------------- DNA (297bp) protein (99aa) |
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002D6260B
Uncharacterized protein {ECO:0000313|EMBL:KIO48393.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_2210_17
unknown
|
Not on your lists |
comp(15476..15733)
----------------- DNA (258bp) protein (86aa) |
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_2210_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15912..16763
----------------- DNA (852bp) protein (284aa) |
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPL1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48528.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|