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SCNpilot_cont_1000_p_scaffold_532_7

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(8065..8946)

Top 3 Functional Annotations

Value Algorithm Source
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 288.0
  • Bit_score: 412
  • Evalue 4.40e-112
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 282.0
  • Bit_score: 401
  • Evalue 1.70e-109
  • rbh
tRNA dimethylallyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFB1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 288.0
  • Bit_score: 412
  • Evalue 3.10e-112
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGGTCCGACCGCAAGCGGGAAAAGCAGGATTGCTCTGGACATAGCCAAATATTTCCCGGTGGAAATCATCAGCGTCGATTCGGCACAGGTATATCGGCATATGAATGTCGGTACCGCGAAACCCAGCCAGGAAGCCAGAGCGTCGGTGCCGCACCATCTCGTCGACCTGATCGAACCGCATCAACGGTACTCTGCGGCACAATTTCTGCATGATGCCCTGGCGGCTCTGCGCGAAATTACGGAACGGGGAAACATCCCGCTGCTGGTTGGCGGAACCATGCTCTACTTCCGGACGCTGATCGAAGGTCTTTCGGAGCTGCCCGCTGCGGACGGCATCGTGCGGACGATGATCGAAGACAGAGCCAAGACGCGTGGGTGGCCTGAAATTCATGCAGATTTGTTGCAATTCGATCCGGTCAGCGCCGCGCGGATCAAGCCAACCGATAGCCAGCGAATCCAGCGTGCTCTTGAAGTATATTATCTGACTGGCAAGCCGATGTCGGAAATTTTCAAGAAGTCTCGCGCTTCCGGTATTCCTTATCGCGCCATTTCCATTGCGCTGGTTCCTGGCGATCGCGGTGTTCTGCATCAGCGCATCGCGCAGCGCTTCGAAGACATGCTCGAACTCGGATTGATTGATGAAGTTCGGGCAATCCGTGATAAATTTCGCATTACCGGCGAAAGCCCGTCGATGCGTTGCGTCGGTTACCGCCAGATCTGGATGCATCTGGAAAAAAAAATGGATATCGCGGAAACGCGGCAAAAAGCACTGGCTGCCACCCGGCAATTGGCAAAACGGCAATTGACCTGGTTGCGCTCGATGCGGCATGTGCAGGAGTTCGATTCCTCACTGAGCGCGTTGCTGGTAAAATCGGGATGA
PROTEIN sequence
Length: 294
MGPTASGKSRIALDIAKYFPVEIISVDSAQVYRHMNVGTAKPSQEARASVPHHLVDLIEPHQRYSAAQFLHDALAALREITERGNIPLLVGGTMLYFRTLIEGLSELPAADGIVRTMIEDRAKTRGWPEIHADLLQFDPVSAARIKPTDSQRIQRALEVYYLTGKPMSEIFKKSRASGIPYRAISIALVPGDRGVLHQRIAQRFEDMLELGLIDEVRAIRDKFRITGESPSMRCVGYRQIWMHLEKKMDIAETRQKALAATRQLAKRQLTWLRSMRHVQEFDSSLSALLVKSG*