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SCNpilot_cont_1000_p_scaffold_532_11

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 11678..12682

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 314.0
  • Bit_score: 592
  • Evalue 4.60e-166
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 314.0
  • Bit_score: 553
  • Evalue 4.10e-155
  • rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFB0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 314.0
  • Bit_score: 592
  • Evalue 3.30e-166
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGACCGTTAGCGACATCAGTGTAGCAAACATGACCAATGAACGTGGTTCTTATGGAGAACGGCCAATGATGAAAGTGTTGCTTGCAAACCCCAGAGGCTTCTGTGCCGGGGTTGATCGCGCCATTGAAATCGTCGAGCGGGCATTGGCAATGCATGGCGCTCCCATTTACGTCCGCCATGAAGTGGTGCACAACCGTTTCGTGGTGGAAAATCTTGAGAAGAAGGGCGCGGTATTTGTCGAAAACCTTGATGAAGTTCCGGTGGGCAGCATTCTGATATTCAGCGCCCATGGAGTTTCGCATGAGGTGAGGCGGGAAGCCGAGGCGCAACAGTTCAAGGTTTTTGATGCGACTTGTCCGTTGGTGACGAAAGTTCATATTGAAGTCGCGAAAATGCGCGAGCAGGGAAGAGAAATCATCATGATCGGCCACCAGGGCCATCCCGAGGTGGAAGGGACCATGGGCCAGGCCGAAGGGGATGGTCCGCAGATGTATCTGGTGGAAACAGAAGAGGATGTGGACAGCCTGCAGGTAGAGGACCCCACGCATCTGGCGTATGTTACCCAGACCACGCTTTCGGTGGATGATGCCACCCGTGTAATCAAGGCATTGAAGAGGCGTTTCCCCAAGATTACCGGCCCCAAGAAGGACGATATATGCTATGCCACGCAGAATCGTCAGGATGCGGTCAAAATGATGGTGAAGCAGTGCGATCTGGTGATCGTTGTCGGTTCGCCGAACAGCTCCAACTCCAACCGCTTATGTGAAGTCGCGAGAAATGCCGGGGTAGATGCGTACATGATAGACCGTGCGGAGCAATTGCAGGAAAAATGGCTTGAAGATAAAAACCGGATAGGCATCACGGCCGGTGCATCGGCTCCCGAAGTGCTGGTGCAGGAAGTTATCTCGCGGCTCAGGCAAATAGCGGCGGGACACAGGGAGGTAGTGGTGGAGGAACTCAGTGGCGTAGTCGAGTCAGTGGTTTTTCCGCTGCCCAAGAATTGA
PROTEIN sequence
Length: 335
MTVSDISVANMTNERGSYGERPMMKVLLANPRGFCAGVDRAIEIVERALAMHGAPIYVRHEVVHNRFVVENLEKKGAVFVENLDEVPVGSILIFSAHGVSHEVRREAEAQQFKVFDATCPLVTKVHIEVAKMREQGREIIMIGHQGHPEVEGTMGQAEGDGPQMYLVETEEDVDSLQVEDPTHLAYVTQTTLSVDDATRVIKALKRRFPKITGPKKDDICYATQNRQDAVKMMVKQCDLVIVVGSPNSSNSNRLCEVARNAGVDAYMIDRAEQLQEKWLEDKNRIGITAGASAPEVLVQEVISRLRQIAAGHREVVVEELSGVVESVVFPLPKN*