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SCNpilot_cont_1000_p_scaffold_532_17

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 17356..17685

Top 3 Functional Annotations

Value Algorithm Source
Ribosome hibernation protein YhbH n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGV8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 110.0
  • Bit_score: 185
  • Evalue 2.30e-44
Ribosome hibernation promoting factor HPF {ECO:0000313|EMBL:KIO49545.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 110.0
  • Bit_score: 188
  • Evalue 6.60e-45
sigma 54 modulation protein/30S ribosomal protein S30EA; K05808 putative sigma-54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 105.0
  • Bit_score: 180
  • Evalue 4.00e-43

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGAATCTTAACCTTACCGGTCATCACGTGGAAATAACTCCGGCCATGCGTGACTACGTCACTTCAAAGCTGAGCAAGATCACCCGTCATTTTGATCATGTTATTGATGTCACCGTGATTCTCTCGGTGGAAAAGCTCAAGCAAAAGGCCGAGGCAAATGTGCATGTGCGCGGGAAGGATATTTTTGTCGAAACCGATGGCGCTGATATGTATGCTTCCATCGATAGCCTGGTGGACAAGCTGGATCGGCAAATACTGAAGCATAAGGAAAAGAACGCGAGTTATCGCAACGGTGCGCTGAAGAACCAGGATGTGAATACGCCCGAATAA
PROTEIN sequence
Length: 110
MNLNLTGHHVEITPAMRDYVTSKLSKITRHFDHVIDVTVILSVEKLKQKAEANVHVRGKDIFVETDGADMYASIDSLVDKLDRQILKHKEKNASYRNGALKNQDVNTPE*