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SCNpilot_cont_1000_p_scaffold_978_5

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 4738..5412

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 225.0
  • Bit_score: 267
  • Evalue 1.80e-68
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 226.0
  • Bit_score: 257
  • Evalue 3.10e-66
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJV4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 225.0
  • Bit_score: 267
  • Evalue 1.30e-68

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GTGGTGAGGCTTAAAAAAGGAGATAAACTGACGCTGTTCAATGGCGATGGAGGAGAATATCCAGCCGAAATTCTGGATACCAGCCCGAAAAGCGTCACCGTCATTCCAGAAGCGCATCTGGGTATTGAGCGCGAATCGCCGCTTGACATAACGCTCGTTCAGGCTTTGTGCAGCAACGAAAAAATGGACTGGATCGTGCAAAAGAGCGTGGAGCTGGGGGTTTCCCGCTTTCAGCCGGTTACGGCCCGGTTCGGCGTGGTCCGGCTTTCGAAGGAAAGGGCCGAGAAAAGAATGAGGCACTGGCAGGATGTTGTCATTTCTGCCTGCGAGCAGTGCGGTAGAAACCGCATTCCTCCCGTACTACCGTTGATGCCATTGTCAAGCTGGCTCGAAGGAGTGCCAGATGAATGCAAGGATATGGATAATCCGGATTCGCAAAAATGCTTCATGCTTTCGCCGACTGCTGCAGAAGGTTTGCGTGATTTTCCGAGGCTGCCTGGTCTGAGCCGAATAGATCTTCTCGTAGGGCCTGAAGGCGGTTTCGACACAGACGAGGAAGCTGCCGCTGTTATGGCGGGATGTACCCCGTTGCGTCTGGGAAAGCGGCTGCTACGCACCGAGAGTGCGGGGTTGGCAGCATTGGCTGCCATGCAGGCGCTATGCGGCGACTACTGA
PROTEIN sequence
Length: 225
VVRLKKGDKLTLFNGDGGEYPAEILDTSPKSVTVIPEAHLGIERESPLDITLVQALCSNEKMDWIVQKSVELGVSRFQPVTARFGVVRLSKERAEKRMRHWQDVVISACEQCGRNRIPPVLPLMPLSSWLEGVPDECKDMDNPDSQKCFMLSPTAAEGLRDFPRLPGLSRIDLLVGPEGGFDTDEEAAAVMAGCTPLRLGKRLLRTESAGLAALAAMQALCGDY*