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SCNpilot_cont_1000_p_scaffold_978_16

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(18560..19663)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJA1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 314.0
  • Bit_score: 489
  • Evalue 2.50e-135
  • rbh
Nitrogen assimilation regulatory protein NtrX {ECO:0000313|EMBL:KIO50458.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 281.0
  • Bit_score: 492
  • Evalue 7.20e-136
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 318.0
  • Bit_score: 471
  • Evalue 2.20e-130
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGAGCAACAATACCATATTAGTCGTCGACGACGAGATTGGCATACGCGAACTGCTGTCCGAAATCCTGAGGGATGAAGGGTATCGCGTTGCGCTCGCGGAAAACGCTGGCGAGGCGCGCAATTGGCGCAAGCGGACTCGTCCCGATTTGGTGCTGCTGGATATCTGGATGCCGGATACGGACGGCATTACCCTCTTGAAAGAGTGGGCCAGCACGGGACTTCTGACCATGCCGGTAGTGATGATGTCCGGGCACGGCACAATCGATACCGCGGTGGAAGCAACACGCATGGGCGCATCCGGCTATCTCGAAAAACCCGTACCGCTGCAAAAACTTCTCAGCACCGTGGGACGGGCGTTGCGCAGCGGGCAAATCAGGTCGGGCATGGGACTGCCGCTTGCCAATCTTGGCGGAGGTCCGTTGATCGCCGATCTTAAAAAAAGGCTGGAGCAGGTGCTCAACCTCAAAACACCGGTGCTGCTTACAAGCGAACCCGGAACCGGAGTGGATCTTTGCGCACGTTTTCTTCACCGTCCCGCCACCCCCTGGGTGGAGCCGGATAATCTGGCCGTGCTCGCAAGCGCTCCGTTTGATTTACTCGAGCAGGCGAAAGGCGGAGTATTGTTTCTCAAGGAGATAGGGGATCTCAACAAGTTGGCGCAAAAGGGATTGCTTCTGATGCTGGGCAAGCTGGAAAAATATGGTGTGAGGCTGGTATGCGCCACATCCATGCCTCTGGCCGCACTGACTGCGCAAGGCGCTTATGACCCGAAGCTGTACGAATTATTGAATGGCCTATGCATCAATGTCCCCGCATTGCGGGAACACCGCGAAGATATCCCGGTAACCTGTACCGGCGACGAACTGACGGCGGATGATGTAAAGCAGATATTGGCGTCGTCATCCCCTCTTCAATCCGTTGCGGGCATACCCCTGGATCTGCCGTTGCGCGAAGCGCGGGATATGTTCGAGAAAACTTATTTTGAACAGCTCATCGATCAGGAAAGCGGCAACATGACGAGAGTTGCGGAGCGCGCCGGGTTGGAGCGCACTCATCTGTATCGAAAGCTCAAGCTGCTGGGAATCAAGCTACGGAACCACTGA
PROTEIN sequence
Length: 368
MSNNTILVVDDEIGIRELLSEILRDEGYRVALAENAGEARNWRKRTRPDLVLLDIWMPDTDGITLLKEWASTGLLTMPVVMMSGHGTIDTAVEATRMGASGYLEKPVPLQKLLSTVGRALRSGQIRSGMGLPLANLGGGPLIADLKKRLEQVLNLKTPVLLTSEPGTGVDLCARFLHRPATPWVEPDNLAVLASAPFDLLEQAKGGVLFLKEIGDLNKLAQKGLLLMLGKLEKYGVRLVCATSMPLAALTAQGAYDPKLYELLNGLCINVPALREHREDIPVTCTGDELTADDVKQILASSSPLQSVAGIPLDLPLREARDMFEKTYFEQLIDQESGNMTRVAERAGLERTHLYRKLKLLGIKLRNH*