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SCNpilot_cont_1000_p_scaffold_978_21

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(24892..25395)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 167.0
  • Bit_score: 274
  • Evalue 1.10e-70
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 167.0
  • Bit_score: 262
  • Evalue 7.20e-68
Peptide deformylase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC19_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 167.0
  • Bit_score: 262
  • Evalue 2.30e-67

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGGCACTCCTGAAGATATTGCTCTATCCAGACGAACGTCTGCATATCGTCGCGGACCCGGTATCGAAAGTTAACGAGGAAACCAGGCTCCTCGTGCGCGATATGGCGGAAACAATGTATTCCGCACGTGGCATCGGCCTGGCAGCAACTCAGGTCGATGTGCATCAACGCGTGATCGTTATCGACGTTTCCGACACCCATGACACGCTGTACGTATTTATCAATCCCGAGATCGTCGCGAGGAGTGGCGAATCCGATTATGAAGAAGGCTGTCTGTCAGTCCCGGGAGTCTTCGGAAAAGTATCTCGTGCCCATCAAATTACGGTCAACGCGCTCGATGCCGACGGTCAGCCGTTCACGCTCGATGCGGATGGAGTGCTGGCGGTATGCATTCAGCATGAAATGGATCATTTGCTGGGCAAGGTATTCGTCGAGTATTGGTCACAAATGAAGCAATCCCGCCTGCGCACAAAACTGAAAAAGCAGCGGCGCAAGGTGATGTGA
PROTEIN sequence
Length: 168
MALLKILLYPDERLHIVADPVSKVNEETRLLVRDMAETMYSARGIGLAATQVDVHQRVIVIDVSDTHDTLYVFINPEIVARSGESDYEEGCLSVPGVFGKVSRAHQITVNALDADGQPFTLDADGVLAVCIQHEMDHLLGKVFVEYWSQMKQSRLRTKLKKQRRKVM*