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SCNpilot_cont_1000_p_scaffold_978_30

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 34223..35287

Top 3 Functional Annotations

Value Algorithm Source
FIG000906: Predicted Permease n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHM5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 354.0
  • Bit_score: 532
  • Evalue 2.50e-148
  • rbh
Permease {ECO:0000313|EMBL:KIO50446.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 354.0
  • Bit_score: 549
  • Evalue 3.70e-153
permease YjgP/YjgQ; K11720 lipopolysaccharide export system permease protein similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 354.0
  • Bit_score: 497
  • Evalue 4.80e-138
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGATAACGGTTGATCGTTACCTGGCATTGCAGGTCGCGATCGGCCTGGCAATCGCAGCCGCCGTCTTGCTGCCATTGTTCGGGTTTCTCGATCTGCTGGAGCAACTGGATGCCGTCGGGAAGGGCACTTTTCAGGTACAGGACGCATTCCTGCATATGGCATTCCTGCTGCCGCGCCGCTTTATCCAGCTTGCGCCTTTTGTTGCGCTGCTGGGCAACGTCATTGCCCTTGGCCGGCTGGCGATTGCCTCCGAATTGACCGCGCTGCGAGCGGCCGGCATGTCCCCCATCAGAATCAGCATGGCCCCGCTGGGAATGGGACTGATCCTCCTGTTGTTTATCGCCTTGCTGGAACAGTTCATCGCTCCGCAACTTCAGCAAAAAGCGATTTCCTGGAAGGCAGCCGCTCTCGACAAGAGCGCTTCGCTTGGCAAGAATCTCGGAATCTGGACGCGGGATGAAAGGAACATATTGCGCATCGGCGAAATGCTGCATGCTGGAAGAGCAGCGGATATCGAGATAATGAATTTTGACAAGGATGGTTTCCTACTGGCTCATATCCGCGCCAAGCATGCCGATTTCATTGACGGCGATATGTGGGAGCTGAGCGAAGTCACGACCCGGACATTTTCGGAGAACCGCATCGAGTCGGTCACTGCGGATTCCCTGAAATGGAAGTCTTTCCTGAACCCGGATGATATTTCCACGCTGACCAAGGAGCCGGATAGTCTTTCACCCGTCGAATTGTTTCTGCATGTGCGCTTTTTGCGCGCCACCGGGCAGGAGGCGGAGGCTTATGCCCTAGCCTTGTGGCGAAAGGCCGGCGTGGTTCTGACCACCATTGCCATGCTGCTGCTCTCGATCCCTTTTGTTTTTGGATCGGTACGGACGGGACTGGGGAATCGGCTTGTGCTCGCAGCCATGCTGGGTATTTCCGTATACTTGCTCGATCAGGTTTTTTCGAATCTCGGATTATTGTGGCATCTGAATCCCGCGCTGACGGCACTACTTCCTGGCGCAATACTGATAGCTCTCGCAAACGTCTGGCTGCGACGTGTATTTTAG
PROTEIN sequence
Length: 355
MITVDRYLALQVAIGLAIAAAVLLPLFGFLDLLEQLDAVGKGTFQVQDAFLHMAFLLPRRFIQLAPFVALLGNVIALGRLAIASELTALRAAGMSPIRISMAPLGMGLILLLFIALLEQFIAPQLQQKAISWKAAALDKSASLGKNLGIWTRDERNILRIGEMLHAGRAADIEIMNFDKDGFLLAHIRAKHADFIDGDMWELSEVTTRTFSENRIESVTADSLKWKSFLNPDDISTLTKEPDSLSPVELFLHVRFLRATGQEAEAYALALWRKAGVVLTTIAMLLLSIPFVFGSVRTGLGNRLVLAAMLGISVYLLDQVFSNLGLLWHLNPALTALLPGAILIALANVWLRRVF*