ggKbase home page

SCNpilot_cont_1000_p_scaffold_1155_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 958..1869

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZM9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 295.0
  • Bit_score: 497
  • Evalue 1.00e-137
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KIO49401.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 303.0
  • Bit_score: 581
  • Evalue 9.70e-163
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 303.0
  • Bit_score: 457
  • Evalue 3.60e-126
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGTGGTTCATATTACCTTGGAGCAATGGCGGTCATTGATTGCGGTGGTGGACGCCGGCGGTTACGCCCAGGCAGCTGAAATGCTGTTTAAAAGCCAGTCGGCCGTTACTTATGCGGTGCAAAAAATAGAATCCCTGCTGGGCGTGAAAGCGTTTGAAATTCAGGGGCGCAAGGCGATCCTCACGCCCACAGGTCAGATGCTCTACCGGCGTGCGTTGGCGTTAATGGATGAGGCAGTGGATCTGGAACGGGCCGCTCATAAACTGTCGGCTGGTTGGGAAGCGGTCATACACATCGCAGCTGAAATCCTCTTTCCCTCTCGCTTGCTATTGGCGTGTCTGGAGCATTTTGGCCAGGAGAGTCCCCGTACGCGAGTCGAATTGCTCGAATCGGTGATTGGCGGTGCTTCCGATGCCTTGCTCAAGGGGGAGACGGATCTGGCGATTTCACCACAGCTGCCGCCCGGATTCCTGGGCGATCTATTAATGCGGATACGATTGACCGCAGTGGCACATGCGGATCATCCCCTGCATCATCACGGCGGGGAATTGACATATCGGGATCTGCGGGCACATCGCCATCTGGTAGTACGGGATTCCGGTATCAAGCGGGATCGGCGCGCAGTGAGCGTCGAGGTGGATCAACGTTGGGCAGTGGGCCAGATCGCCACGTCGATCCAGGCAGTCTGCATGGGATATGGCTTTGCCTGGCTGCCAGAGGATCATATTCGCGAAGAACTGAGGACGGGCATACTCCGGCCTCTTCCATTGCGAGAAGGGGGAACACGGGAGGTGCCGCTCTACCTGGTTCTGGCCAATCCGGACTTTGCGGGACCTGGCGTAAGGCGTCTGGCGGAGATCATCCGGAAATCGGTAGAAGAGGAATGTGCGTCCCAAGAATCATCCTCATAA
PROTEIN sequence
Length: 304
MVVHITLEQWRSLIAVVDAGGYAQAAEMLFKSQSAVTYAVQKIESLLGVKAFEIQGRKAILTPTGQMLYRRALALMDEAVDLERAAHKLSAGWEAVIHIAAEILFPSRLLLACLEHFGQESPRTRVELLESVIGGASDALLKGETDLAISPQLPPGFLGDLLMRIRLTAVAHADHPLHHHGGELTYRDLRAHRHLVVRDSGIKRDRRAVSVEVDQRWAVGQIATSIQAVCMGYGFAWLPEDHIREELRTGILRPLPLREGGTREVPLYLVLANPDFAGPGVRRLAEIIRKSVEEECASQESSS*