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SCNpilot_cont_1000_p_scaffold_1155_21

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 18776..19852

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL32_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 358.0
  • Bit_score: 657
  • Evalue 9.00e-186
  • rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093, ECO:0000313|EMBL:KIO49738.1}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 358.0
  • Bit_score: 665
  • Evalue 4.60e-188
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 358.0
  • Bit_score: 643
  • Evalue 4.20e-182
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGAACAAGAGTATTGCCGCAAAGCTCACGCAACTAAGCGTGCGCCTGGAAGAATTGAATCGTATGCTGAGCAGTGAGAGTGCTACGGCGAACCTCGACAGCTATCGCAAGCTGACGCGTGAGCGTGCCGAGATTGCGCCGGTGGTCGAGCTTTATGAGGCGTATCTGCAAAGCGAGCGCGATATACATACCGCGCAGGAAATGTGTGCCGATGCTGAAATGCGCGAGTTCGCCGATGCCGAAATAAGGGATGCAAAGGAAAAGATCACTCACCTCGGCGCCGAACTGCAGAAGCAATTGTTGCCCAGGGATCCAAGCGACGAGCGCAATATTTTTCTGGAAATCCGTGCCGGAACGGGCGGAGATGAATCGGCGCTGTTCGCGGCTGACTTGTTTCGCATGTATGCGCGTTTTGCCGAACGCCAGCGCTGGCAGGTCGAAATAATCTCGCAGAGTCCTTCCGAAGCTGGCGGCTACAAGGAGATTATCGCCAAAATTATCGGTAACGGAGCTTATTCCAAGCTTAAATTCGAGTCGGGCGGGCACCGGGTGCAGCGCGTGCCGGTAACGGAGACCCAGGGGCGCATTCATACTTCCGCCTGCACCGTTGCGGTAATGCCTGAGGCAGACGAGATCATGGATGTGGTGCTGAATCCAGCGGAATTGCGCGTCGATACCTTTCGCGCATCAGGGGCCGGTGGCCAGCATATCAACAAGACCGATTCCGCCGTGCGCATAACCCATCTGCCTACGGGAATCGTGGTCGAATGCCAGGATGGACGCTCCCAGCATAAAAACAAGGCGCAGGCGATGAGCGTTCTGGCGGCGCGAATACGCGACAGGCAAACGCAGGAGCAGCAAAGCAAGCAGGCGGCTACCCGCAAGTCTCTCATTGGGACTGGCGACAGGTCAGGGCGAATCCGTACCTATAACTTTCCGCAAGGGCGGATAACCGATCACCGCATCAACCTCACGCTGTACAAGATGGAGCAGATCATGGATGGGGATTTGAACGAGCTATGCTCCGCGCTTGTGTCCGAGCATCAGGCCGAGCAGTTGGCGGCGATGGGCGAGTAG
PROTEIN sequence
Length: 359
MNKSIAAKLTQLSVRLEELNRMLSSESATANLDSYRKLTRERAEIAPVVELYEAYLQSERDIHTAQEMCADAEMREFADAEIRDAKEKITHLGAELQKQLLPRDPSDERNIFLEIRAGTGGDESALFAADLFRMYARFAERQRWQVEIISQSPSEAGGYKEIIAKIIGNGAYSKLKFESGGHRVQRVPVTETQGRIHTSACTVAVMPEADEIMDVVLNPAELRVDTFRASGAGGQHINKTDSAVRITHLPTGIVVECQDGRSQHKNKAQAMSVLAARIRDRQTQEQQSKQAATRKSLIGTGDRSGRIRTYNFPQGRITDHRINLTLYKMEQIMDGDLNELCSALVSEHQAEQLAAMGE*