ggKbase home page

SCNpilot_cont_1000_p_scaffold_1155_26

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(22838..23752)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator MetR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJQ6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 304.0
  • Bit_score: 515
  • Evalue 3.60e-143
  • rbh
Transcriptional activator MetR {ECO:0000313|EMBL:CCU62987.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 304.0
  • Bit_score: 515
  • Evalue 5.00e-143
LysR family transcriptional regulator; K03576 LysR family transcriptional regulator, regulator for metE and metH similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 304.0
  • Bit_score: 498
  • Evalue 1.10e-138
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGCTTGAACTGCGACATCTGCGCACCCTGGCGGCATTGCATGAAACAGGCAGTGTATCGCGCGCGGCCAAGCGGGTGCACCTTACGCAGTCCGCCCTGTCGCACCAGATCAAGGCGCTCCAGACCCATTATCGCCTCCCCATGGTGCAGCGGCGCGGCCAGTCGGTTGAGCTTACCGATGCAGGGAAACACCTTGTTGCCCTTGCGGAGACAGTGCTGGAAGCGATTCAGGTGACTGAACGCGGCCTTGCAAAAATATCTGAACAGGCATCGGGCAGCTTGCGCATCGCACTGGAATGCCATACCTGCTTCGACTGGCTGATGCCATTGATGGATGCATTCAGGCAGCACTGGCCAGATGTGGAACTGGACTTGGTGTCGGGATTCCATAGCGACCCCATCCGGTTACTGGAAGAGGGCCTGGCGGATGTGGTGATCGGTTCCGAAAATAAGCGGAGGCGCGATATTGCCCACCATCCCCTGTTTTGTTTTGAAATTCTTGCGGTGCTGCCGCCGGATCATGCATTGCGCAGAAAACGGATACTTCAAGCGCCGGATTTCTCCGGCATGACGCTTATTACCTACCCGGTACCTGAAGACCGAATCGATCTGATCCATCATGTGCTAAAGCCAGCCGGAATTCATCCTGAGCGGCGTACCGCGGAGCTGACCGTAGCCATTCTGCAACTGGTAGCCAGCCGGCGTGGAATCGCGGCGCTTCCCAGCTGGGGCCTGAAAAATTACGTGGAACATGAGTATGTGATAGCGCGTCGTATCGGTTCGAGCGGCTTATGGAGCAACCTGTATGCTTCGACGCTGAAGGAAACGGCAGCACGGCCTTATCTTCGCGATTTTCTTGCAACCGCGAAAAATACCTGTTTTGCCACGCTGGAGGGAATCGTCCCCCTGGAGTAA
PROTEIN sequence
Length: 305
MLELRHLRTLAALHETGSVSRAAKRVHLTQSALSHQIKALQTHYRLPMVQRRGQSVELTDAGKHLVALAETVLEAIQVTERGLAKISEQASGSLRIALECHTCFDWLMPLMDAFRQHWPDVELDLVSGFHSDPIRLLEEGLADVVIGSENKRRRDIAHHPLFCFEILAVLPPDHALRRKRILQAPDFSGMTLITYPVPEDRIDLIHHVLKPAGIHPERRTAELTVAILQLVASRRGIAALPSWGLKNYVEHEYVIARRIGSSGLWSNLYASTLKETAARPYLRDFLATAKNTCFATLEGIVPLE*