ggKbase home page

SCNpilot_cont_1000_p_scaffold_1244_29

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(31727..32395)

Top 3 Functional Annotations

Value Algorithm Source
Ferric siderophore transport system, periplasmic binding protein TonB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKI2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 223.0
  • Bit_score: 358
  • Evalue 4.10e-96
  • rbh
Ferric siderophore transport system, periplasmic binding protein TonB {ECO:0000313|EMBL:CCU63986.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 223.0
  • Bit_score: 358
  • Evalue 5.70e-96
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 196.0
  • Bit_score: 314
  • Evalue 3.60e-83
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGGAAGATCCCGAAGAAAGCCCAAAGCCGGTTTGGGTGCGCTGGGGCGGCGTCGCGCTTTGCCTGGGCGTTGCGATTGCGCTGGGATTATGGCTGAAGGATTTTCTGGGTGGCGACACGCCCCAGCACAAGCCCTCGCTCCAGCAGATTACATTGATCAAGCCCCCTCCGCCACCGCCACCCCCGCCGGAGAAGCCGCCGGAACCGGTGGTGAAGGAGGAGATAAAGCTGTCCGAACCCGAGCCCGAGCCGATGGACCAGGCCGATGAGCCGCCACCCGGTCCCGATCTGGGCATCGATGCCGAAGGAACAGGAAGCGGGGATGGATTCGGACTGGTAGGGAAAAAGGGAGGCGCGGACTTGATCGGCGGCTCCCGGGGCAATCCGTGGGCCTGGTATGACGCCATAGTGAATGACGCCATCAATTCCGCCTTGCAGGATGCTCTTGCGCGCGAAAACGCGCTCAAGGACAAAACCTACAAAATCATAGTGAAGGTGTGGATCGACCCTGGCGGCAAGGTATCGCGCATCGCCTTGGTCGAAAACACGGGTGACGCCAAGGTGGATGAGTTGATCAAGAACGTGCTTCAGAATCTGCGAGCGTTGCGGGAAGGTCCCCCTGCGGATATGCCGCAGCCGTTGAAGATACGCGTGACCTCGCGCGCCTGA
PROTEIN sequence
Length: 223
MEDPEESPKPVWVRWGGVALCLGVAIALGLWLKDFLGGDTPQHKPSLQQITLIKPPPPPPPPPEKPPEPVVKEEIKLSEPEPEPMDQADEPPPGPDLGIDAEGTGSGDGFGLVGKKGGADLIGGSRGNPWAWYDAIVNDAINSALQDALARENALKDKTYKIIVKVWIDPGGKVSRIALVENTGDAKVDELIKNVLQNLRALREGPPADMPQPLKIRVTSRA*