ggKbase home page

SCNpilot_cont_1000_p_scaffold_1815_11

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(9676..10413)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecO n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGL3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 242.0
  • Bit_score: 408
  • Evalue 5.00e-111
  • rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 242.0
  • Bit_score: 408
  • Evalue 7.00e-111
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 242.0
  • Bit_score: 347
  • Evalue 3.30e-93
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGGCAGCGATGACTTCCGACAATCACCGCATCGACGCCCAGCCCGGATTCGTCCTGCATGCCTATCCCTACCTTGAAACCAGCCTCGTGGTCGAGGCCTTTACCCGCGATTTCGGAAGAGTGCCTCTGGTGGCCAAGGGCGCCAAACGGCCAAGATCCGCCATGCGCGGCCTGTTGCTGGCATTTCAGCCCCTGCTGCTCAACTGGGGAGGCAAATCGGAATTGCGGACCCTGCATAAAGCGGAATGGCAAGGCGGGCTCGCGCCATTGCAGGGAACAAGCCTGATTTGCGGCTTTTATCTGAATGAGCTCTTGGTGCGGCTATTGCACCGCAATGATCCCCACGAGCAGTTATTCGTCTACTATCAGGAGACGCTGGAAGCGCTAGGCAGCCAAAAGGATACCATTCCCATACTGCGGCGATTCGAACAGCGCATGCTACGGGAGCTGGGATATGCGCTCACGCTGGATCGCGACGTCGAGTCGGGCAAACCCACGGAACCGCAGCAGAATTACAGCTATGAAATCGAGCGCGGACCCGTGGCATGGGACGAAAATCGCCCTGGCCGCGGCTTGCCATTGCAAGGCAAAACGCTCCTGGACATGCAGCAAGGCGACTATTCCGCAACCACCACCCGGCAGCAGAGCAAGGCGCTGATGCGCTACATACTGAACCATTATCTGGGCGGGCAGCCGCTGCATACCCGGCAACTGTTGAAAGACCTGCAGCAGTTATGA
PROTEIN sequence
Length: 246
MAAMTSDNHRIDAQPGFVLHAYPYLETSLVVEAFTRDFGRVPLVAKGAKRPRSAMRGLLLAFQPLLLNWGGKSELRTLHKAEWQGGLAPLQGTSLICGFYLNELLVRLLHRNDPHEQLFVYYQETLEALGSQKDTIPILRRFEQRMLRELGYALTLDRDVESGKPTEPQQNYSYEIERGPVAWDENRPGRGLPLQGKTLLDMQQGDYSATTTRQQSKALMRYILNHYLGGQPLHTRQLLKDLQQL*