ggKbase home page

SCNpilot_cont_1000_p_scaffold_2639_6

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(5180..6400)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (Unrelated to HemY-type PPO in GramPositives) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQZ7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 402.0
  • Bit_score: 567
  • Evalue 1.10e-158
  • rbh
Heme biosynthesis protein HemY {ECO:0000313|EMBL:KIO48803.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 401.0
  • Bit_score: 571
  • Evalue 1.30e-159
HemY-like; K02498 HemY protein similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 401.0
  • Bit_score: 495
  • Evalue 1.20e-137
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGAAGGCGGTGCTCTGGCTGCTGGCGCTATCCGCCGTGGCGGTGGCCGTTACCATTGCCGCCAAGTACAACAACGGCTATGTACTGATGGTAGCCCCGCCTTACCGGGTGGAAATCTCGCTCAATCTCATGGTCGTGCTGCTGCTCGCCACCATTCTTATCGGCTATTTCTTCGTGCGGCTCATCGCCATCATCCTGGGGATACCCGCCGAGGTGCGTCAATTTCGCGCGCGCCGGCGCCGGGAGAAGGCACGCAGGATGATGCTGGACGGCCTGAAGGCCTTTTTTGAAGGGCGCTACGCCAAAGCCGAAAAAACAGCCGCCGCGGCTCTCGAGCTGGAGGAATCGCCGCGCGTCAGCACGATCAATGCTCTGGTGGGAGCCCGCTCCGCGCACGAGCTGAGAAAATATCCGCAACGCGACGAGTTTCTGTCAAAAGCGGAAGGATTCGCGCCCAGGGAAGTCACCGTGCGGCTGATAACCCAGGCAGAGATGCTGCTGGACGAACAGCACGCCGGGGAAGCATTGAAAATATTGAACTCGCTGCGCTCCACGGGGGCACCGCTGCATACCGCCGCCTTGCGGCTGGAATTGAAGGCGCAGCAATTATCCGGAAACTGGTATGCCGTGCTGGACCTGCTCAAGCAGCTGGAGCAGCGCAATGCGCTGGACAAGACGGTAATCGAGCAATTGCGGCGCCATGCCCACATAGAAAATATTAGGCACAAGGTGCTGAACCCGGAAACCTTGAAGGAATATTGGAGAAACATGTCGTCATCCGATAAGAAGGATGTCCGGGTGGCCGCCACTGCTGTCCGTGCCTGCCTGTCCATAGGAGATTGCGCAGCAGCGCATCAGATCATCGAGCAAAGCCTGGACAGGCAATGGGATTCGGAACTGGCGGGATTGTATGCGGAATGCCTGGGAAATGATGCGATCAGGCAGATCGAACGCGCCGAGAGCTGGCTGAAATCCCATCCCAATGACGCCAGTCTGCTGCTCGCGCTTGGCAAATTGTGCGTGCACAGCGAGTTGTGGGGCAAAGCGCAAAGCTACCTGGAAGCGAGCCTGTCAGTCGAACCCAGCCACCCCGCCCACCTGGCACTGGCGCAACTGAACCAGAAAATCGGCCAGTCCGAGCTCGCCAGGGATCATTATGGCAAAGGGCTGGAGCTTGCATTGCGCAGGCTCGAGGTCGCCGGCGGAGGCGGCAGTGAATAA
PROTEIN sequence
Length: 407
MKAVLWLLALSAVAVAVTIAAKYNNGYVLMVAPPYRVEISLNLMVVLLLATILIGYFFVRLIAIILGIPAEVRQFRARRRREKARRMMLDGLKAFFEGRYAKAEKTAAAALELEESPRVSTINALVGARSAHELRKYPQRDEFLSKAEGFAPREVTVRLITQAEMLLDEQHAGEALKILNSLRSTGAPLHTAALRLELKAQQLSGNWYAVLDLLKQLEQRNALDKTVIEQLRRHAHIENIRHKVLNPETLKEYWRNMSSSDKKDVRVAATAVRACLSIGDCAAAHQIIEQSLDRQWDSELAGLYAECLGNDAIRQIERAESWLKSHPNDASLLLALGKLCVHSELWGKAQSYLEASLSVEPSHPAHLALAQLNQKIGQSELARDHYGKGLELALRRLEVAGGGGSE*