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SCNpilot_cont_1000_p_scaffold_2210_9

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 8169..8981

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003778817 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 259.0
  • Bit_score: 354
  • Evalue 1.20e-94
  • rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KIO48397.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 253.0
  • Bit_score: 399
  • Evalue 3.60e-108
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 244.0
  • Bit_score: 348
  • Evalue 2.10e-93
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGGAACGAACGAGAATGAACCAACCCTTGACCACCACGTTATCCCCCATACCGCTCTATACCCAGATCAAGGATATATTGCGCGAGCGCATTCTCGACGGCACCTACAAGCCCCATGAGCGCTTGCCGTCTGAAAGCGGGATGAGCAATATATTTGGCGCCAGCCGCATTACGGTAAGGCAGGCCTTGAGCGACCTGCAAAATGAAGGATTGATTTTCCGGATCCCCGGCAAGGGAACGTTCGTTGCCAAAGCCAAGGCGTTTCAGCAATTGATGCAACTGGAAGGGTTCGCGGAGGCGATGTTGCGTATGGGTTATGAAATCTACAACAAGGTGACCAGCCACAAATCGGTTCCCGCATCCCTTGCCGTTGCCCAAAAACTCGCGCTTGAGCCAGGGGTGCCAGTAACGGAAATCAAACGGGTGCGCCATCTGAACCGGGAGCCGCTATCGATGGAGGTCACTTACCTGCCGGAGGAGATAGGCGAACGCCTGCGCAACATCGATCTTCCCAACCGCGATATTTTCCTGGTGCTGGAAAATGACTATGGCATCGCTCTAGGGCATGCGGATCTGCAGATCGATGCCATGCTGGCCGATCACAATCTGGCGAACCTGCTGAAGATGGAAGAAGGTTCCCCGGTATTGCGCATGGAGCGGCTCACGCATACCGCCGCAGGCAAGCCCCTGGATTTCGAGTATCTGTATTTCCGCGGCGACGCATTTCAATATCGCCTGAGAATATCGCGGCAGGCTGCCAGCACCTCCGCATCCGGCGCATGCGAAACGGCCGAAAGTCGCACGGCAAAATAG
PROTEIN sequence
Length: 271
MERTRMNQPLTTTLSPIPLYTQIKDILRERILDGTYKPHERLPSESGMSNIFGASRITVRQALSDLQNEGLIFRIPGKGTFVAKAKAFQQLMQLEGFAEAMLRMGYEIYNKVTSHKSVPASLAVAQKLALEPGVPVTEIKRVRHLNREPLSMEVTYLPEEIGERLRNIDLPNRDIFLVLENDYGIALGHADLQIDAMLADHNLANLLKMEEGSPVLRMERLTHTAAGKPLDFEYLYFRGDAFQYRLRISRQAASTSASGACETAESRTAK*