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SCNpilot_cont_1000_p_scaffold_2210_13

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 12562..13395

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Herbaspirillum lusitanum RepID=UPI000382C7BC similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 244.0
  • Bit_score: 379
  • Evalue 3.60e-102
ABC transporter permease {ECO:0000313|EMBL:KIO48529.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 252.0
  • Bit_score: 412
  • Evalue 4.20e-112
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 254.0
  • Bit_score: 372
  • Evalue 1.10e-100

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGAGCAGCCTCACTGAAACCGCACCAGTTTACACGGAAAGGGTAAGGCTCCTTCGGTTGGGAAGCACGCGGCTGCTGCTGCGCGCTTCATCCATTGCGGTTTGCATCCTGGCATGGCATCTGGCCTCGACCTCGCAGGCGGATCTCGGCGTGGTGACGTTCCGGAATGTGCCGGCCCCGCTGGAAGTCCTTGCCGCCGGATGGGAATTGTTCCGATCCCAGGCATTGCTGTCCCATCTGACAGCCAGCCTATCGCGCGTTTTTTGCGGTTTTCTGATCGCGGCCATCGCAGGCGTAGCCCTGGGGTTGGTGATCGGGCGCTTGCGCGTCGCGGAAGATACCCTGCTGCCGCCCCTGGAAATACTGAGGCCCATTCCCGCGGTCGCCTGGATTCCCTTATCGATCCTGATGTTTCCCTCATCCGAGCTTTCCATGATTTTCATCACATTCACGGGCGCGCTGTTTCCGATTCTGCTCAATACCATCCACGGCGTCGAGACGATCGATGCGCGGCTCATTGCATCCGCGCGCAGCCTGGGGAGCGGTCCTGTGGCTATCTTCACCGAAGTGATCCTGCCGGCGGCCGCCCCCAGCATATTCACCGGCTTGTCGATCGGCATGGGGACGGCCTGGTTCTGCCTGGTAACCGCCGAGATGATATCGGGCCAGTTCGGCATCGGCTACTACACCTGGGCTTCGTACACGATCCAGAACTATGCGGACATCGTGGTAGGCATGCTGCTGATAGGCTTGCTGGGCATGGGCAGCAGCATGGCGGTCCGAAAGCTCGGCAATGCCCTGATGCCCTGGCAGGCTTCCGGAGCAAAGAAATGA
PROTEIN sequence
Length: 278
MSSLTETAPVYTERVRLLRLGSTRLLLRASSIAVCILAWHLASTSQADLGVVTFRNVPAPLEVLAAGWELFRSQALLSHLTASLSRVFCGFLIAAIAGVALGLVIGRLRVAEDTLLPPLEILRPIPAVAWIPLSILMFPSSELSMIFITFTGALFPILLNTIHGVETIDARLIASARSLGSGPVAIFTEVILPAAAPSIFTGLSIGMGTAWFCLVTAEMISGQFGIGYYTWASYTIQNYADIVVGMLLIGLLGMGSSMAVRKLGNALMPWQASGAKK*