ggKbase home page

SCNpilot_cont_1000_p_scaffold_2985_1

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(2..1072)

Top 3 Functional Annotations

Value Algorithm Source
riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 350.0
  • Bit_score: 501
  • Evalue 2.00e-139
  • rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH00_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 353.0
  • Bit_score: 504
  • Evalue 7.40e-140
  • rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 353.0
  • Bit_score: 504
  • Evalue 1.00e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGAACCAGTCTCCCACCCCGTTTTCGCCGGACGATCATGCCTGCATGGCTCGTGCCTTGCGGCTTGCTGAAAAGGGCTTGTATAGTACCAGCCCCAACCCGCGAGTAGGCTGCGTGATCGTGCGTGACGGCGTCATGGCAGGCAGCGGCTGGCATCAGTTCGCCGGCGGCCCTCATGCCGAAATCAACGCGCTCGCCGCCGCAGGCCGCGCGGCACGGGGCGCTGCCGCTTATGTCACCCTGGAGCCGTGCAGCCATCATGGCAGAACGCCCCCCTGCGCCGAGGCGCTGATAGCGGCCGGCATCGCGCGAGTGATTATGGCCATGGAGGATCCCAATCCCCTGGTGGCAGGCAAAGGCGCAGCGTTGCTGCGGCAGGCGGGAATCGAGGTCGTTGCCGGTTTGATGGAAACGCAGGCAAAAGCGCTCAATGCAGGTTTTGTCTCGCGGATGACGCGGCAGCGCCCATGGGTACGGATGAAAATCGCCGCCAGCCTCGACGGCAGGACAGCCCTCAATAACGGCGCCAGCCAGTGGATAACGAGCGAGCCGGCGCGGCGTGACGGCCATCGGTTGCGCGCGCGCTCCTGCGCCGTGCTCACAGGCATCGGCACCGTGCTGGCAGACAACCCTGAGCTCAACGTCCGTTACGTGGAGACACCCAGGCAGCCTCTGCGGGTTGTTCTGGACAGCGGCCTGCATATTCCCCTGGATTCCAGAGTGCTACGAGAGGGGCGGGCATTGATTTTTACCGCCGGCGCGGACGAAGAAAAAATCGCCGTGCTGCGCGGCATGGGAGCGAACGTGATCCCGCTTCCCGGCACGGACGGGAAAGTCGATCTCGGAAAAATGATGCAGGCACTTGCCGGCCTGGAGATAAACGAGCTGCTGGTCGAAGCGGGACCCAGGTTGAATGGCGCGCTCATGCAGGCCGGGCTGGTGGATGAGCTGGTGATTTACCTCGCCCCTTGCCTGATCGGACACGCGGCACGCGGCATGGTGGAACTCCCGGAACTGGCAACTCTCCAGGAAAAGCGCGCGCTGATCATTCACGATATCCGTTCAATAGGG
PROTEIN sequence
Length: 357
MNQSPTPFSPDDHACMARALRLAEKGLYSTSPNPRVGCVIVRDGVMAGSGWHQFAGGPHAEINALAAAGRAARGAAAYVTLEPCSHHGRTPPCAEALIAAGIARVIMAMEDPNPLVAGKGAALLRQAGIEVVAGLMETQAKALNAGFVSRMTRQRPWVRMKIAASLDGRTALNNGASQWITSEPARRDGHRLRARSCAVLTGIGTVLADNPELNVRYVETPRQPLRVVLDSGLHIPLDSRVLREGRALIFTAGADEEKIAVLRGMGANVIPLPGTDGKVDLGKMMQALAGLEINELLVEAGPRLNGALMQAGLVDELVIYLAPCLIGHAARGMVELPELATLQEKRALIIHDIRSIG