ggKbase home page

SCNpilot_cont_1000_p_scaffold_3249_7

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(4653..5915)

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446, ECO:0000313|EMBL:KIO50054.1};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 416.0
  • Bit_score: 722
  • Evalue 3.70e-205
isocitrate dehydrogenase, NADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 415.0
  • Bit_score: 704
  • Evalue 1.80e-200
  • rbh
Isocitrate dehydrogenase [NADP] n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFN6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 416.0
  • Bit_score: 706
  • Evalue 1.50e-200
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGTATCAGCACATAAAAGTGCCAACTGACGGCGATAAGATTGGTGTCAATACGGATTCATCTTTGCGCGTGCCGGATAACCCGATCATTCCTTTCATCATGGGGGATGGAATCGGCGTGGACATTACGCCCGTTATGAAGACCGTGGTCGACGCCGCCGTGAATGCAGTTTATGGCAAAACGCGCCGCATTTCATGGATGGAAATCTATGCCGGCGAGAAATCCACTCATATCTATGGTGAAAATGTGTGGCTGCCGGACGAGACGCTGGCGGCAGCGAGGGAATACGCGGTTTCGATCAAGGGACCGCTCACCACGCCTGTTGGAGGCGGCATTCGCTCCATTAACGTGGCTTTACGCCAGAAACTGGATTTATACCTGTGCCTCCGGCCGGTGCGCTACTTCCATGGGGTCCCCAGTCCGCTGAAAAACCCGGAGAAGACGGATATGGTGATTTTCCGGGAAAATTCGGAAGACATCTATGCCGGTATCGAGTGGGAAGCCGAATCCGAGAGCGCAAGAAAAATCATTCATTTTTTGACAACGGACATGGGAGTCACCCAGATACGCTTTCCCCAAACGTCGGCGATCGGCATCAAACCGGTGTCGCGGGAGGGTACGGAACGCCTGGTGCGCAGGGCAATACGCTACGCCATCGCCGACAAGCGCCGTTCGGTCACCCTCGTGCATAAAGGGAACATCATGAAATTCACCGAGGGGGCCTTCAAGAATTGGGGTTACAAGCTGGCAGCACAGGAATTCGGAGGCGTCCTGCTGGAAGGAGGTCCGTGGATGAAACTTCCCGATGATCAGGGTGGAATCGTTATCAAGGATGTGATTGCCGACGCTTTCCTGCAGCAGATATTGTTGCGCCCAGAGGAATATGACGTGATTGCCACACTGAATCTGAATGGCGACTATATATCGGATGCACTGGCCGCTCAGGTTGGCGGCATCGGTATCGCGCCGGGAGCCAATCTGGGCGACTCGGTCGCGATGTTCGAGGCAACCCACGGTACCGCGCCAAAATATGCAGGCAAGGATCAGGTGAATCCCGGATCAATCATCCTGTCCGCCGAAATGATGCTGCGTCACATGGGCTGGGTGGAAGCCGCGGATCTGATCATTGCCGCGATGGAAACCACGATTCGAGACAAGGTCGTAACTTACGATTTCGCGCGGCAAATGGCGAATGCGCAACAGGTCTCCTGTTCCGCATTCGGACGCGCGCTTGTCGAACGCATGAACCTGGCTACCGCCTGA
PROTEIN sequence
Length: 421
MYQHIKVPTDGDKIGVNTDSSLRVPDNPIIPFIMGDGIGVDITPVMKTVVDAAVNAVYGKTRRISWMEIYAGEKSTHIYGENVWLPDETLAAAREYAVSIKGPLTTPVGGGIRSINVALRQKLDLYLCLRPVRYFHGVPSPLKNPEKTDMVIFRENSEDIYAGIEWEAESESARKIIHFLTTDMGVTQIRFPQTSAIGIKPVSREGTERLVRRAIRYAIADKRRSVTLVHKGNIMKFTEGAFKNWGYKLAAQEFGGVLLEGGPWMKLPDDQGGIVIKDVIADAFLQQILLRPEEYDVIATLNLNGDYISDALAAQVGGIGIAPGANLGDSVAMFEATHGTAPKYAGKDQVNPGSIILSAEMMLRHMGWVEAADLIIAAMETTIRDKVVTYDFARQMANAQQVSCSAFGRALVERMNLATA*