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SCNpilot_cont_1000_p_scaffold_4332_2

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 609..3230

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat n=1 Tax=Nitrosospira sp. APG3 PF4_9PROT">RepID=M5DPF4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 526.0
  • Bit_score: 565
  • Evalue 1.10e-157
  • rbh
TPR repeat {ECO:0000313|EMBL:CCU61320.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 526.0
  • Bit_score: 565
  • Evalue 1.60e-157
tetratricopeptide repeat protein,methyltransferase family protein similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 840.0
  • Bit_score: 505
  • Evalue 3.30e-140
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2622
ATGGCCGTCGAGTATCATCGGGCGGGAAATTTGCACCAGGCGGAAACCATATACCGCCAGATACTCCGCATGGCCCCCAGCCACCCGGGTGCACTTCACTTCCTCGGGCTGATAGCAAAGCAGTCGGGGCAGTTGGAAGTCGCGCTGGAACTTATCGGAAAGTCGATCGCCAGTGAACCGGCTTATGCCGAGGCGCACGCCAACCTGGGAAACGCGCTGTGCCTGGTCGGGAGAGTGGAGTCAGCAATCGCGAGCTATCGGACGGCGCTATCGCTGAAGCCGGATCTTGCGGAAGTGCATGCCAATCTGGGCAATGCGCTGATACAGCAGCGCCGGTTCGATGAAGCCGCGGCCAGCTACGAAAGGGCGCTTGCGCTGAAGCCAGACCTGGCGGAATTGCACAATAACCTGGGCAATGTCCTGTACCAGCAGGGCAAGCGGCACGAGGCCGCGGCGAGCTACCGCTCTGCGCTACGGTACAAGCCTGATTTCGCCGAGGCCCATAACAACCTGGGGAATGTGCTGAACGAGTTGGGCAACCGGGAAGATGCCGTCGTCCACTACCGCAAGGCGCTCGCCAGCCAGCCAGCATTTCCCGAAGCCTGCAACAATCTCGGCAACGCGCTAAACGGACTTGGAAAAACGGATGAAGCCATTGCCAGCTATCGTGCCGCGATTACCCATAGGCCACGATATGCTGGAGCGCACAAAAACCTGGGTAATCTCCTGCGGAAACTGGGCGATCTGGAAGGAGCGGTAGCAAGCTACCAGCGAGCGCTCCGGCTTACGGATGACCCGGAAACCACGGAAGGCTTCGTCCAGTGCATAAAGAACGTTTACTTCACTCGGGAAATCGACGGCCTCCGCCCCTTGCTGGCCAGAGCCCTGTCCACTCCCTGGGGGCGACCCGCAGAACTGACGAACCCGGCGGTGTCGCTCCTCAAGCTCGACCCCGGTATCGGGCGCCTTATCCAGCGCGCAAACTGCGCCTGGCCGGGAAGGTTGTCGCGCCATGAGCTTTTTGAAGATGCCGAATTTTCCAGCGTCGCGAGCTCCCCTCATCCAGGCGACCCAGGCGACCCAGGCAATGCGGCCGGTGTTACCCCACCCTTAGGCATGCAATCATCCTTGCCGCCGGGCCTGGCCCTGGCTTGCAATGACATCCTGCTTCGCTGCCTGCTCGAAAATACGCCGGTTTGCGATATCGCGCTCGAGCGATTCCTGACCATGGCAAGGCACATACTGCTGGATATGGCGATCAGCATCTGTCCCGAACAGCCCAATGCTGCCTTCAATGAACGGGCGCTTGTTTTTTATTGCGCGCTGGCGCGCCAGTGCTTCATCAACGAATATATTTTTGAATGCACAAGCGAAGAATGCGACAAGGCTGAGCTGTTGCGGGAACGCATTGGCGCAGCGCTGGATACGGAATCGCCGGTGCCCGCGCCATGGCTCATCGCTTTTGCCGCCTACCGCCCCCTGACCGACCTGCCTCCAGCCCAAACGCTTCTCGATCTCTTTCCGGATATCTCCGCCCCCAGTGTTTCCTCTAGTGCCTCTGACACACCAGGCTCGTCAGCCGCGCATGCCATGGCTGCGCTGCTGGCGCAGCAGGTGCGCGAACCGCTGGAAGATCAGAAAAATCGCTCCCTTGTCCCGCACCTCACATCCATAGCGGACAGTTCTCGCCTGGTGCAGCAGCAGTACGAACAAAATCCCTATCCGAGATGGGTGAAGCTGCCGGCCGCCGCCCAGCGGGTCTTTCTAGATGAGGACCTGCGCCAGCGGTTCCCCTTTGCGCGCTTCCAGCCGATGGAGCCGACGAGTCCGCGTGATCCAGGTGGAGAGAAGGCCCATGAGGGGATCGATATCCTGGTTGCGGGCTGTGGAACCGGCCAGCATTCCATTGCAACGGGCCAGCACTACCGCGACGCCAGAGTCCTGGCTATCGATCTAAGTCTGGCGAGCCTCTGCTACGCAAAAAGAAAGACTGATGAATCGAGTCTTGAAAATATCGCCTACGCGCAAGCGGACATCATGGCACTCGACCCTGCCGCCCTAGGTGGCCGAACCTTCGATCTCATCGAATCCATCGGGGTACTGCATCATCTTGCCGATCCGCTTGCGGGTTGGCGAAAGCTGCTCAGCCTCTTGCGCCCGGGTGGATTCATGCGCCTGGGATTCTACAGCGCGCTTGCCCGTAAAAATGAAATAGCTGCGCAAGACTTTGTCAGGAATCTTCTTGCCAGCTTCGGCAGGAAGGCGAAGGATGCAACGCCGGAAGATATCCGCAGGTGCCGCCAGGAAATGATGACTGCCGGGAATGCAGGCGCATTCCGGCAAGTTCTCTCCGCCAGGGATTTTTATACGGCGAGCGAGTGCCGCGACCTGCTGTTTCACGTGCAGGAGAATTGCTATACGCTCCCCCAGCTCAAGGAATATCTTGCTCAACTGGGCGTGTCATTGATCGGTTTCTCACTGGATCCCGATATCATGGCTCGCTATGCGCAGCAGTTCCCCGATGACAGCGCGCAAACCGACCTCGACAACTGGCATTTATTTGAAACCGGGAATCCGGATACCTTTGCCGGCATGTATCAGTTCTGGGTGCAGAAAGCTTGA
PROTEIN sequence
Length: 874
MAVEYHRAGNLHQAETIYRQILRMAPSHPGALHFLGLIAKQSGQLEVALELIGKSIASEPAYAEAHANLGNALCLVGRVESAIASYRTALSLKPDLAEVHANLGNALIQQRRFDEAAASYERALALKPDLAELHNNLGNVLYQQGKRHEAAASYRSALRYKPDFAEAHNNLGNVLNELGNREDAVVHYRKALASQPAFPEACNNLGNALNGLGKTDEAIASYRAAITHRPRYAGAHKNLGNLLRKLGDLEGAVASYQRALRLTDDPETTEGFVQCIKNVYFTREIDGLRPLLARALSTPWGRPAELTNPAVSLLKLDPGIGRLIQRANCAWPGRLSRHELFEDAEFSSVASSPHPGDPGDPGNAAGVTPPLGMQSSLPPGLALACNDILLRCLLENTPVCDIALERFLTMARHILLDMAISICPEQPNAAFNERALVFYCALARQCFINEYIFECTSEECDKAELLRERIGAALDTESPVPAPWLIAFAAYRPLTDLPPAQTLLDLFPDISAPSVSSSASDTPGSSAAHAMAALLAQQVREPLEDQKNRSLVPHLTSIADSSRLVQQQYEQNPYPRWVKLPAAAQRVFLDEDLRQRFPFARFQPMEPTSPRDPGGEKAHEGIDILVAGCGTGQHSIATGQHYRDARVLAIDLSLASLCYAKRKTDESSLENIAYAQADIMALDPAALGGRTFDLIESIGVLHHLADPLAGWRKLLSLLRPGGFMRLGFYSALARKNEIAAQDFVRNLLASFGRKAKDATPEDIRRCRQEMMTAGNAGAFRQVLSARDFYTASECRDLLFHVQENCYTLPQLKEYLAQLGVSLIGFSLDPDIMARYAQQFPDDSAQTDLDNWHLFETGNPDTFAGMYQFWVQKA*