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SCNpilot_cont_1000_p_scaffold_5862_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 3542..4909

Top 3 Functional Annotations

Value Algorithm Source
Response regulatory protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH39_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 450.0
  • Bit_score: 804
  • Evalue 4.40e-230
  • rbh
Response regulatory protein {ECO:0000313|EMBL:CCU61834.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 450.0
  • Bit_score: 804
  • Evalue 6.20e-230
two component sigma-54 specific Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 450.0
  • Bit_score: 772
  • Evalue 5.80e-221
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
ATGAGAGGAGTGGAAGTGAATCAGGAGAAAAGGAAGCTGTTGGTTATCGAAGACGATCCTGGATTGCAAAAGCAGTTGCGCTGGAGTTTCGACGCCTATGAAGTGCTGGTGGCGGCAGACCGCGAAAGTGCCCTTTCTCAAGTCAGGCGGCATGAGCCGGCCGTTATCACCATGGATCTCGGGCTTCCCCCCGATCCCGATGGGGCTTCCGAAGGGCTCGCAACACTGGAGCAAATACTCGAGCTTGCACCGGATACCAAGCTGATAGTTCTTACAGGGAATCAGGATCATGGGAACGCATTGAAGGCTATCGGTTTGGGCGCTTATGACTTTCATCAGAAGCCCTTTGACTCCGACATGCTGAGCCTGGTCGTGGAAAGGGCATTTTACGTTTATGCCTTGCAGCAGGAGAACCGCCGCTTATTGCAGACTCAGGCATACTCGCTCATTACGGGCATCATTACCCGGGACCCTGCATTGCTCAAGGTATGCCGCAGCGTCGAAAAGGTGGCGCCATCCGACGCAACCGTGATGCTGCTCGGGGAAAGCGGTACAGGCAAGGAAATTCTGGCTCGGGCGCTGCACCAGTCGAGTGCCAGGCAGGGGAAGCGTTTCATGGCCATCAATTGCGCCGCCATTCCCGAATCCTTGCTGGAAAGCGAATTGTTCGGGTATGAGAAGGGTGCGTATACCGGCGCGGCGAAGCAGACGCTGGGCAAAATCGAGCTTGCCGATGAAGGCACCTTTTTTCTTGATGAGGTGGGCGATCTGCCCATGGCATTACAGGCGAAATTGCTCCGGTTCCTGCAGGAAAGAGTCATCGAGCGTATCGGAGGACGCAAGGAAATACCGGTGGATGTCCGTATCGTCTGTGCGACCCATCAGAACCTGAAGAAGTTGATCGAGGAGGGGCGGTTTCGCGAGGATCTCTATTATCGGCTCAGCGAGATCGTTATTACGATTCCCCCTTTGCGAGAACGGATCGGGGATGCCGCCTTGCTGGCGCATCACTTTAAAAACAAATTCTGTGCGCAGGAGAAACGCTCCTCCCTGAATTTCAGCCAGGAGGCAATTGCCGCGATCGAAGGCCATCCCTGGCCCGGCAACGTGCGGGAGATGGAGAACTGCATCAAGCGTGCGGTCATCATGGCGGATGGTCCTCTGATCACCGCCGAAGATCTCGGTTTGCAATCCGCCGCTGCTCTTGCCGACCCCATCAACCTTAGGCAGATACGGGACAAGGCAGAGTGCGACGCGCTCATGAAGGCGCTGGCCCGAGTGGACGGAAATGTTGTCAAGGCGGCGGAGCTGCTCGGTGTGAGCCGGCCCACCATTTACGATTTGATGAACCGGCACGGGCTGAAATGA
PROTEIN sequence
Length: 456
MRGVEVNQEKRKLLVIEDDPGLQKQLRWSFDAYEVLVAADRESALSQVRRHEPAVITMDLGLPPDPDGASEGLATLEQILELAPDTKLIVLTGNQDHGNALKAIGLGAYDFHQKPFDSDMLSLVVERAFYVYALQQENRRLLQTQAYSLITGIITRDPALLKVCRSVEKVAPSDATVMLLGESGTGKEILARALHQSSARQGKRFMAINCAAIPESLLESELFGYEKGAYTGAAKQTLGKIELADEGTFFLDEVGDLPMALQAKLLRFLQERVIERIGGRKEIPVDVRIVCATHQNLKKLIEEGRFREDLYYRLSEIVITIPPLRERIGDAALLAHHFKNKFCAQEKRSSLNFSQEAIAAIEGHPWPGNVREMENCIKRAVIMADGPLITAEDLGLQSAAALADPINLRQIRDKAECDALMKALARVDGNVVKAAELLGVSRPTIYDLMNRHGLK*