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SCNpilot_cont_1000_p_scaffold_6036_8

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(4328..4756)

Top 3 Functional Annotations

Value Algorithm Source
Pyrimidine dimer DNA glycosylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DRJ8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 142.0
  • Bit_score: 217
  • Evalue 7.20e-54
Pyrimidine dimer DNA glycosylase {ECO:0000313|EMBL:CCU62055.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 142.0
  • Bit_score: 217
  • Evalue 1.00e-53
pyrimidine dimer DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 145.0
  • Bit_score: 166
  • Evalue 4.60e-39

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
GTGCGCCTCTGGACGGTACATCCGCAGTATCTGGATGCAAAGGGGCTTACGGCCGCATGGAGAGAAGCGCTGCTTGCCCAAAAAGTGTTGTCCGGAGCAACCGCAGGCTATCGATTCCATCCCCAGCTCATCCGGTTTCGTTCGCATCCCCAGCCTCTCCAGGCAGTTGGGGCATTTCTCGCCAGCCTCGCGGATGAGGCGAAGCACCGAGATTATCGTTTCGATAAAACAAAGATCTTATATCCAAGCATCGCGGAGGAAATTGAAGAGACGGAAGAACAACTAATATTCGAATGGGCTCATTTGCTACAGAAATTGCAGAAACGCGCACCCATTCTTCATCGCCGGCACTACGAAATCATAAAGCCGGAGTCCCACCCATTATTTCGAATAGTCCCCGGTGAAATAAGGAAGTGGGAAAAACGCTAG
PROTEIN sequence
Length: 143
VRLWTVHPQYLDAKGLTAAWREALLAQKVLSGATAGYRFHPQLIRFRSHPQPLQAVGAFLASLADEAKHRDYRFDKTKILYPSIAEEIEETEEQLIFEWAHLLQKLQKRAPILHRRHYEIIKPESHPLFRIVPGEIRKWEKR*