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SCNpilot_cont_1000_p_scaffold_6036_15

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 9794..11518

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 574.0
  • Bit_score: 572
  • Evalue 6.50e-160
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 572.0
  • Bit_score: 478
  • Evalue 3.80e-132
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHT3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 576.0
  • Bit_score: 564
  • Evalue 1.30e-157
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1725
GTGCTCGCGCTTGCCGCAATAAGCATGGTTGCAACCGCCGCTTCAGCGCCCATGCTGGCCGCGCTGGCAGTACCGGCGCTGGATGGCGTACTCGCAGGACAGGATGTCGAAACGATGCAACTGGTATTGCTGGCAATAATGGTGTTGTCTGCCGCTCGCGGCATGTCGGGTTTTATCGCGGCTTATTCGACGGCCTGGCTGGCAAATAAACTGATGCAGGATTTGCGTGGCGAGATATTCGATAAGCTGCTGACGCTTCGGGCAAGCTACTATGCATTTCGCGGCGGCGGCAATCCGGTTTCGAAAGTGGTAACGGATATCGATCAGCTCGTCAGTTCCTTCACGAATGTGGCGACGGTCATGGTAAGGGACAGCTTCATTGTCGTAAGCCTGCTCGCATGGATGGTCTATCTCAATTGGAAACTTTCGCTGCTGGCTGTATTGATGGTCTCGGTTATCGTGTTGATCGGGCAATTGATCAGTGATCGCCTGAAAAGGGCGGCCACGGAGGCATACGAAGCGGCGGATCATGTTACCGGTATCCTGAAGGAATCCATCGAGAATTACGCGGCGGTAAAACTATATGCCGGCGAGCAGTATCAGGCTGCCCGGATGCGGGAGGAGGCAGACAAGGTGCACGATTCCCTCATGAGGCGAGCGGCTGCCGAGGCCCTGGCGATTTCTTTTGCGCAGGTTGCAGCCGGTATCGCGGCAGTCATCGTTTTTTATATTGCAACCCGCCAGGTGTTTGCCGGGGAAACGACGGCGGGAGGCTTCGCTTCTTTTGCTCTCGCCATATTGATGCTGATTCCGGCGGCGCGGCGCATTGCCGGGCTGGATGAATTTCTGCGTTCCGGCCTGGCGGCTGCTACCCGCATCTTTTCGCTGCTGGATGAGAAAGCTGAACCGGATAGCGGAACGATTCGCATGGAGCGCGCCAGAGGACAGCTCAAGTTCGAGCATCTCACCTTTCGGCCGCCTTCGGTTCCGAAGGAACCCGATTCTCAGCCTTCCCATGGATCGAGCTGGCGCCACATCCCTGAACCAGGCGGCCCGCTGGAGGACATCCAACTGACAATTCAGCCCGGCGAGCAGGTTGCTTTGATAGGGCTTTCGGCAAGCAGCAAATCAACGCTTGCAGAACTGATCCTCCGCTTCATCGACCCGACTTCGGGAAGGATCCTGCTCGATGATCATGATATTGCGCATCTCACGCTAGCCAGCTTGCGCGGCAATATCGCGCTGGTATCCGAGAAAACGACGATATTCAGTGATACGGTTGCTGCCAACATTGCCTATGGCGAGATGGGCCGCGCAACCGAAGGAAGGGTTATGGCGGCAGCCCAGGCAGCGCATACCATGGAATTCATCAGGCATATGCCCCTGGGATTGCAGACTGTCGTGGGAGAGCGGGGAATACAGCTATCCGCGAGCCAGAAGTTGCGGGTATCCATCGCCAGAGCCCTGCTGAAAGATGCGCCTATCCTCATTTTCGATGAGGCGGCCGAGCCGTCGGCGGACCAGGAGTCGCTGCACCATGTTCTGGCGGCGTTGAGAACCGTAATGCACGGACGCACGACGCTTGTCATCGCCCGCTGCCTATCCACGGTGGAAAAAGCGGATCGTGTGGTGATGCTGCACCAGGGCCGTATCACCGAGGTGGTTCGCAGGGAATTACTCGCGACAAAAGAGGCTTATACCCGGCTGGAAAGCTACCTGGGCTAA
PROTEIN sequence
Length: 575
VLALAAISMVATAASAPMLAALAVPALDGVLAGQDVETMQLVLLAIMVLSAARGMSGFIAAYSTAWLANKLMQDLRGEIFDKLLTLRASYYAFRGGGNPVSKVVTDIDQLVSSFTNVATVMVRDSFIVVSLLAWMVYLNWKLSLLAVLMVSVIVLIGQLISDRLKRAATEAYEAADHVTGILKESIENYAAVKLYAGEQYQAARMREEADKVHDSLMRRAAAEALAISFAQVAAGIAAVIVFYIATRQVFAGETTAGGFASFALAILMLIPAARRIAGLDEFLRSGLAAATRIFSLLDEKAEPDSGTIRMERARGQLKFEHLTFRPPSVPKEPDSQPSHGSSWRHIPEPGGPLEDIQLTIQPGEQVALIGLSASSKSTLAELILRFIDPTSGRILLDDHDIAHLTLASLRGNIALVSEKTTIFSDTVAANIAYGEMGRATEGRVMAAAQAAHTMEFIRHMPLGLQTVVGERGIQLSASQKLRVSIARALLKDAPILIFDEAAEPSADQESLHHVLAALRTVMHGRTTLVIARCLSTVEKADRVVMLHQGRITEVVRRELLATKEAYTRLESYLG*