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SCNpilot_cont_1000_p_scaffold_6916_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(3198..4091)

Top 3 Functional Annotations

Value Algorithm Source
polyprenyl synthetase; K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 297.0
  • Bit_score: 481
  • Evalue 2.30e-133
  • rbh
Farnesyl-diphosphate synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCH8_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 297.0
  • Bit_score: 481
  • Evalue 7.30e-133
  • rbh
Geranyl transferase {ECO:0000313|EMBL:KIO47991.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 297.0
  • Bit_score: 500
  • Evalue 1.60e-138

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGATCGCTGATTTCCAGGACTGGGCGAAAAGTCGCCAGGCGAATATAGAATCTGTCCTGCAAACCTTCCTTCCCGCCGCAGACATTGCTCCAGAGCGCTTGCATGATGCCATGCGCTATGCTGTCCTGGGAGGAGGAAAGCGCGTTCGTCCGCTGCTGGCTTTTGCCGCGGGTGAGCTGACCGGCGCCAGCGAAGAGAGAGTGGGCATCGCGGCGGCCGCAGTCGAATTGATACATGTCTATTCATTGGTGCATGATGACCTGCCCTGCATGGATGATGACGTGCTGCGGCGGGGAAAGCCGACTTGTCATATCCAGTATGATGAAGCCATTGCTCTGCTGACGGGAGACAGCCTGCAGAGCCTGGCATTTCAATTGCTTGCGGAGCATCGCCTGGCTGATGATGCGCAAACGCAACTTGAAATGATCAGGCGGCTGGCTCAGGCCGCCGGCTCGCGAGGCATGGCAGGCGGACAGGCCGTGGATCTCGACAGTGTTGGGAAGGCATTGAGTTTGCCGGAGCTGGAATTTATGCATATCCATAAAACCGGCGCACTCATCCGTGCAGCAGTTATGTTGGGAGCATATTGCGGAGCATCGCTCGGCGAGAGCGAAGCGGTAAATCTCGATCATTTTGCCAAATGCATCGGCCTGGCTTTCCAGGTGGTCGACGATGTGCTCGATGCGGAGGCCACGACGGCGACCCTGGGAAAAACCGCGGGAAAAGATGCGGAAAATAACAAGCCGACGTATATAAGCCTCCTGGGCGCGAGGCAAGCCCGTGAGCTGGCTGAAGGATTGCGTCGCGATGCCTGCCAGTCACTGGAGATTTTCGGTGCGAAGGCGGAACGGTTGCGTCAGGTAACGGATTTCATCATTCAGCGAAATTTCTGA
PROTEIN sequence
Length: 298
MIADFQDWAKSRQANIESVLQTFLPAADIAPERLHDAMRYAVLGGGKRVRPLLAFAAGELTGASEERVGIAAAAVELIHVYSLVHDDLPCMDDDVLRRGKPTCHIQYDEAIALLTGDSLQSLAFQLLAEHRLADDAQTQLEMIRRLAQAAGSRGMAGGQAVDLDSVGKALSLPELEFMHIHKTGALIRAAVMLGAYCGASLGESEAVNLDHFAKCIGLAFQVVDDVLDAEATTATLGKTAGKDAENNKPTYISLLGARQARELAEGLRRDACQSLEIFGAKAERLRQVTDFIIQRNF*