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SCNpilot_cont_1000_p_scaffold_8801_9

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 7253..8707

Top 3 Functional Annotations

Value Algorithm Source
D-lactate dehydrogenase (cytochrome) (EC:1.1.2.4); K00104 glycolate oxidase [EC:1.1.3.15] similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 479.0
  • Bit_score: 826
  • Evalue 4.70e-237
  • rbh
Glycolate dehydrogenase, subunit GlcD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQD4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 484.0
  • Bit_score: 834
  • Evalue 4.20e-239
  • rbh
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:KIO49638.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 484.0
  • Bit_score: 841
  • Evalue 4.90e-241

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
ATGAGTTCAACTGCCCTCGTTGCCAGCCTGCGTGCTTTCCTGCCTGCGGAGGCGGTGCTTTACGAAGCGGAAGATTTGAGACCCTACGAATGCGATGGCCTGTCCGCATACCGCCAGACGCCGCTGATCGTTGCGCTGCCGGGAACCGAAGAAGAAGTGCTCCGGATTCTCAAGGTATGCCACGCGGCAAAAACGCCCGTGGTAGCCCGGGGCGCAGGAACGGGCTTGTCCGGCGGCGCGCTGCCCCATGCGCACGGGGTCCTGCTATCCCTGGCCAGGCTGAAAAGCATACTTGAAATCGATCCGGCGGCCCGAACCGCCCGGGTACAGCCCGGTGTGCGCAATCTGGCCATCAGCGAGGCCGCAATGCCCTATGGCTTGTACTACGCGCCCGATCCATCCTCGCAAATTGCCTGTTCCATCGGGGGCAATGTTGCCGAAAACTCGGGTGGCGTGCATTGCCTGAAGTATGGGCTTACCGTGCACAATATTCTCAAGCTGAGGGTGATCACCATTGAGGGCGAGATTCTCCAGATCGGCAGCGATGGGCTGGATGCCCCCGGCTATGACCTCCTGGCGTTGATGACAGGGAGCGAAGGCATGCTGGGCATCGTGACCGAGGTAACCGTCAAGCTCATCCCCAGGCCGGAAAAAGCGGAGGTAGTCATGGCCGCATTCGACGACATACGCAAGGCGGGGGATGCGGTGGCGAACGTCATCGCTGCGGGTATTATTCCCGCCGGGATGGAGATGATGGACCGAATCACTACGCATGCCGTGGAGGAGTTTGTCCACGCGGGATACAACCTGGAAGCGGCAGCGATTCTGTTATGCGAATCCGACGGGACGGCGGAGGAAGTGTCGGAGGAAATCCGCCGTATCGACGAGATCATGGAAAGCAGCGGGGCCATGGAGATCAGGGCTTCTTCCAGCGAGGCGGAACGGCTGAGATTCTGGGCCGGCCGCAAGGCTGCATTTCCGGCGGCTGGCCGGGTTTCCCCCGACTACTACTGCATGGATGGCACCATACCCCGCAGCAAGCTATCACAGGTATTGAGCGGGATCGAAGCCCTTTCCCAAAAATACGGCTTGCGTTGCATGAATGTCTTTCACGCCGGCGATGGAAATTTGCATCCGCTGATACTGTATGATGCGAGCAAGCCTGGCGAGCTCGAACTGACTGAGGAATTCGGGGAAAAAATACTTCACATGTGCGTGCAGGCCGGGGGGACCATTACCGGCGAGCACGGAGTTGGCGTGGAAAAAATCAATCAGATGTGCGCCCAGTTCAGGCCGGGCGAACTGGAAATGTTCCATGGAGTAAAAGCGGCATTCGATCCGGAAGGGCTGCTGAATCCCGGAAAAGCCGTTCCCACCCTGCGCCGCTGCGCGGAACACGGCGCCATGCATGTGCGCCGGGGCAAAGAAAAATTTCCCGAATTGCCAAGGTTCTGA
PROTEIN sequence
Length: 485
MSSTALVASLRAFLPAEAVLYEAEDLRPYECDGLSAYRQTPLIVALPGTEEEVLRILKVCHAAKTPVVARGAGTGLSGGALPHAHGVLLSLARLKSILEIDPAARTARVQPGVRNLAISEAAMPYGLYYAPDPSSQIACSIGGNVAENSGGVHCLKYGLTVHNILKLRVITIEGEILQIGSDGLDAPGYDLLALMTGSEGMLGIVTEVTVKLIPRPEKAEVVMAAFDDIRKAGDAVANVIAAGIIPAGMEMMDRITTHAVEEFVHAGYNLEAAAILLCESDGTAEEVSEEIRRIDEIMESSGAMEIRASSSEAERLRFWAGRKAAFPAAGRVSPDYYCMDGTIPRSKLSQVLSGIEALSQKYGLRCMNVFHAGDGNLHPLILYDASKPGELELTEEFGEKILHMCVQAGGTITGEHGVGVEKINQMCAQFRPGELEMFHGVKAAFDPEGLLNPGKAVPTLRRCAEHGAMHVRRGKEKFPELPRF*