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SCNpilot_cont_1000_p_scaffold_1350_9

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 8363..9724

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I0P3_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 454.0
  • Bit_score: 452
  • Evalue 5.50e-124
  • rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDR37447.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 460.0
  • Bit_score: 456
  • Evalue 4.10e-125
wzt; polysaccharide ABC transporter ATPase; K09691 lipopolysaccharide transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 456.0
  • Bit_score: 439
  • Evalue 1.20e-120
  • rbh

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Taxonomy

Burkholderia grimmiae → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGTCCTCTGAGATCGCACTGCGCGTCAACCATGTCAGCAAGGTATTCCGTGCGTACTCGAATCCGGCGAAGCGCCTCACCCACGCGCTCGGCATTCGCGCGAACACTGTCCTGAGGAAGGTCGGGCTGCCGCAGTTGGCGACCGACCACGACGCGATACAGGAGTTCGTCGCACTCGACGACATCAGCTTCGAAGTGATGCGGGGCCACACAACGGGCATTGTCGGACGCAATGGCGCCGGCAAGTCCACGCTGCTGCAGATCATCGCGGGCACGCTGGCCCCCAGCCAGGGCACGGTCGAGGTCAGCGGGAGGATCGCAGCGCTGCTGGAGCTCGGCTCCGGCTTCAACCCCGAGTTCAATGGCATCGAGAATGCCAGACTCAACGCCGCCATTCTCGGCCTCTCTCCGGAGGAAATCGACGCACGGATGGACTCCATCCTGGCATTCGCCGATATCGGCCACTTCGTGAACCGGCCGGTCAAGACCTATTCCTCCGGCATGATGGTTCGCCTCGCATTCGCCGTGCAGGCCCAGGTGGACCCGGAGATACTCATCGTCGATGAAGCCCTGGCCGTCGGCGATGCCAAGTTCCAGTCCAAGTGCTTTGCCCGGCTGGATGCATTGAAGGAAACGGGAACCTCCATCCTGTTCGTGTCCCACTCCACGGAACAGATCGTCAGTCACTGCGATGACGCCATCCTGATCGAGGGCGGGCAGCTGCGGCAGCGTGGCCAGCCGAAGGACGTGGTCCATACCTACCTGGACCTGCTGTTCGGCAAACCGCCGGCATCCACGCCCGCGGCGCGACAGGCGCCTCAATCCACGGAGCCTGTGCCTGCCGGCGCCCCCCCCGTGCTGGAAACGCGGGGCAACAGCTATGCCGACCAGCCCCACTACAACCCCTATGAGTTCCGATGGGGCGACGGTGCCGCGTGCATCGCCGACTTCAGACTGCTTGCCGATGGCGCCGAGGCGGCGCAGATCATCGCCGCGGGCACTTCGCTGCAGCTGGTGCTTGGAATATCGTTCGAACGCGCCATCAGTCGCCCGATCATGGGCCTGACGATCAAGTCGAAGGACGGCGTCACCGTCTTCGGGACAAACTCGGAACTGACCCGTTTCGCAGGCCTGCCCGCCTCGGTCGCGGAAGGCACGGAAATGCAGGTGGATATCCACTTCGAATGCAATCTTGGTCCCGGCGATTACTTCATATCGGTCGGCCTGGCCAGCCGCAAAGGCGAGGAGCTCGTCCCGCACGACCGGCGCTATGACTCCATACACTTCACCGTCACGGACGACGAGTGCTTCGGCTTCACCAAGCTACCGATGACTTTCAGCATCAAGGAACTACGGTCTTGA
PROTEIN sequence
Length: 454
MSSEIALRVNHVSKVFRAYSNPAKRLTHALGIRANTVLRKVGLPQLATDHDAIQEFVALDDISFEVMRGHTTGIVGRNGAGKSTLLQIIAGTLAPSQGTVEVSGRIAALLELGSGFNPEFNGIENARLNAAILGLSPEEIDARMDSILAFADIGHFVNRPVKTYSSGMMVRLAFAVQAQVDPEILIVDEALAVGDAKFQSKCFARLDALKETGTSILFVSHSTEQIVSHCDDAILIEGGQLRQRGQPKDVVHTYLDLLFGKPPASTPAARQAPQSTEPVPAGAPPVLETRGNSYADQPHYNPYEFRWGDGAACIADFRLLADGAEAAQIIAAGTSLQLVLGISFERAISRPIMGLTIKSKDGVTVFGTNSELTRFAGLPASVAEGTEMQVDIHFECNLGPGDYFISVGLASRKGEELVPHDRRYDSIHFTVTDDECFGFTKLPMTFSIKELRS*