ggKbase home page

SCNpilot_cont_1000_p_scaffold_1350_22

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 25530..26948

Top 3 Functional Annotations

Value Algorithm Source
rhlE1; putative ATP-dependent RNA helicase 1; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 449.0
  • Bit_score: 737
  • Evalue 2.20e-210
  • rbh
RNA helicase n=1 Tax=Xanthomonas sp. M97 RepID=UPI00039A6EBF similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 453.0
  • Bit_score: 744
  • Evalue 7.30e-212
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78124.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 449.0
  • Bit_score: 738
  • Evalue 7.40e-210

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGTCGTTCGAAGATCTGGGCCTTGCGCCCTTCCTGCTGCGCGCGCTCGCCGAGCAGGGTTACGAAAACCCCACCCCGATCCAGCAGCAGGCCATCCCGCTGGTGCTGGAAGGCCACGACCTGCTGGCCGGCGCGCAGACCGGCACCGGCAAGACCGCCGCGTTCGGCCTGCCGCTGCTGCAGCACCTGGCCACCTCGGCGCAGGAAGTGCGCAACGGCCCGCGCCGGCCGCGCGCGCTGATCCTGACCCCCACCCGCGAACTGGCCACCCAGGTGCATGACAGCCTGCGCGGCTACAGCAAGTACCTGCGCATCCCCAGCACCTGCATCTACGGCGGCGTCGGCATGGGCAACCAGCTCGACATCCTGCGCCGTGGCGTGGACCTGCTGGTGGCCTGCCCGGGCCGCCTGATCGACCACCTGGAGCGCCGCAGCATCGACCTGTCCGGCATCGAGGTGCTGGTGCTGGACGAAGCCGACCGCATGCTCGACATGGGCTTCCTGCCCTCGATCAAGCGCATCCTGGCCAAGCTGCCCAAGCAGAACCGGCAGACCCTGCTGTTCTCGGCCACCTTCGCCGACCCGATCAAGCAGCTGGCGCTGGAGTTCATGCGCAACCCGCGCGAGGTGATGGTGACCCCGCGCAACACCGTGGCCGAGACCATCGCCCACCGCGTGCACCCGGTCGACGCCGGGCGCAAGCGCGAACTGCTGCTGCACCTGCTGGCGCAGGACTCGCGCGAGCAGACCCTGGTGTTCGCCAAGACCAAGCACGGCAGCGACAAGCTGGCCACGTTCCTGGACAAGTCCGGCATCAAGACCGCGGCGATCCACGGCAACAAGAGCCAGAGCCAGCGCCTGCGCGCACTGGGCGACTTCAAGGCCGGCCGCGTCACCGTGCTGGTGGCCACCGACATCGCCGCGCGCGGCATCGACATCAACGAGCTGCCCAAGGTCATCAACTACGACCTGCCGATGGTGGCCGAGGATTACGTGCACCGCATCGGCCGCACCGGCCGCAACGGCGCCAGCGGCCAGGCGGTTTCGCTGGTGGCGCAGGAAGATGCCAAGTACCTGCGCCAGATCGTGCGCCTGCTGGACCGCGACATGGATATCCGCGACGTGCCGGGCTTCGAGCCGCACACGCCGATCCGCTGGGGCAACAGCGCCCCGGGCAAGGCCGAGCAGCCCGGCGGCGAACGTCCGCCGCGCCGCGGCAATGGCGGCCGCCCCGGCGGCCACCGCGATGCCGCGCCGGGCCAGCGCCGTGGCGGGGCGGGTGCGGCGTCCGGTGGCCGGCGCCGCGCGCCGCCGCCGTGGCGGCCGTGGCCGCGGCAAGGCGCCGCAGCCCAACAGCGCGGTCTGACCGACCCGCCTGGACCCGTAGCGAACGGCCGCGATGCGGCCGTTCGCCATTGA
PROTEIN sequence
Length: 473
MSFEDLGLAPFLLRALAEQGYENPTPIQQQAIPLVLEGHDLLAGAQTGTGKTAAFGLPLLQHLATSAQEVRNGPRRPRALILTPTRELATQVHDSLRGYSKYLRIPSTCIYGGVGMGNQLDILRRGVDLLVACPGRLIDHLERRSIDLSGIEVLVLDEADRMLDMGFLPSIKRILAKLPKQNRQTLLFSATFADPIKQLALEFMRNPREVMVTPRNTVAETIAHRVHPVDAGRKRELLLHLLAQDSREQTLVFAKTKHGSDKLATFLDKSGIKTAAIHGNKSQSQRLRALGDFKAGRVTVLVATDIAARGIDINELPKVINYDLPMVAEDYVHRIGRTGRNGASGQAVSLVAQEDAKYLRQIVRLLDRDMDIRDVPGFEPHTPIRWGNSAPGKAEQPGGERPPRRGNGGRPGGHRDAAPGQRRGGAGAASGGRRRAPPPWRPWPRQGAAAQQRGLTDPPGPVANGRDAAVRH*