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SCNpilot_cont_1000_p_scaffold_1360_13

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(11171..12589)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 472.0
  • Bit_score: 869
  • Evalue 1.60e-249
leuC; putative 3-isopropylmalate dehydratase large subunit LeuC (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 472.0
  • Bit_score: 868
  • Evalue 1.10e-249
  • rbh
3-isopropylmalate dehydratase large subunit n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L4W6_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 472.0
  • Bit_score: 869
  • Evalue 1.20e-249
  • rbh

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGAGCTCCGCACCCAAGACCCTGTACGACAAACTGTGGGACGCGCATGTCGTCGTCCCCGAAAGCGACAGCGCCCCGGCCGTGCTGTACATCGACCTGCACCTGATCCACGAGGTCACCTCGCCGCAGGCGTTCACCGAACTGCGCGAACGCGGCCTCAGCCCGCGCCGCCCGGACCGCACCAAGGCGACGATGGACCACTCCACCCCGACCCTGCCGGCCGCTGCCGACGGCAAGCTGCCGTATGCGAGCAAGGCCTCCGAGGCGCAGGTGCAGATGCTGGCCCGGAACTGCGCCGAGTACGGCATCGAACTGTTCGACATGGCCTCAAGCAGCCGCGGCATCGTCCACGTCATCGCCCCCGAGCAGGGCTTCACCCAGCCGGGCATGACGATTGTCTGTGGCGACAGCCACACCTCCACCCATGGCGCGTTCGGTGCGCTGGCCTTCGGCATCGGCACCAGCGAAGTGGGCCACGTGCTGGCCACGCAGTGCCTGCTGCAGCGCAAGGCCAGGACCATGTCGATCACCGTCGACGGCGAACTGGCACCGGGCGTCGGCGCCAAGGACGTGGTGCTGCACATCATCGGCGTGATCGGGGTCAACGGCGGCACCGGCCACGTGCTGGAATTCCGCGGTTCCACCATTGCCGCGATGGACATGGAACAGCGCATGACCCTGTGCAACATGTCCATCGAGGCCGGCGCCCGCGCCGGCATGGTGGCACCGGACCAGACCACCTTCGACTGGGTCGCCCGCACCCCGCGTGGCCCGAAGGGCGCCGACTTCGACAAAGCGGTCGCCTACTGGAAGACGCTGCGCAGCGACGACGGCGCGCGCTTCGACGTGGAAGTGCGCATCGACGCCGCCGACATCCGCCCCACCCTGACCTGGGGCACGCACCCGGGCACCGCCATCGCGGTGGACGCGCCGATCCCGGCCGCCAACGACGCCGCCGCGCAGAAGGGCCTGGACTACATGAAGTTCGAGGCCGGCCACGCACTGGCCGGCACGCCGGTGGACGTGGTGTTCGTTGGCTCCTGCACCAACGGCCGCCTGAGCGACATGCGCGAGGTGGCGCAGGTGCTGCGCGGCCGCCGCGTCGCCGCCGGCGTGCGCATGCTGGTGGTGCCCGGCTCGGAAATCGTCAAGCGCGACGCCGAGGCCGAGGGCATCCACGACATCGTGCGCGCCGCCGGCGCCGAATGGCGCGAACCCGGCTGCTCGATGTGCATCGCCATGAACGGCGACCTGGTCGCGCCGGGGCAACTGGCGGTGAGCACCAGCAACCGCAATTTCGAGGGCCGCCAGGGCCCCGGCTCGCGCACCCTGCTGGCCACGCCGCTGAGCGCGGCCTGGGCCGCGGTGAACGGCAAGGTCGCCGACGTGCGCGAACTGTTCGACCAGGAGGTGGCGTGA
PROTEIN sequence
Length: 473
MSSAPKTLYDKLWDAHVVVPESDSAPAVLYIDLHLIHEVTSPQAFTELRERGLSPRRPDRTKATMDHSTPTLPAAADGKLPYASKASEAQVQMLARNCAEYGIELFDMASSSRGIVHVIAPEQGFTQPGMTIVCGDSHTSTHGAFGALAFGIGTSEVGHVLATQCLLQRKARTMSITVDGELAPGVGAKDVVLHIIGVIGVNGGTGHVLEFRGSTIAAMDMEQRMTLCNMSIEAGARAGMVAPDQTTFDWVARTPRGPKGADFDKAVAYWKTLRSDDGARFDVEVRIDAADIRPTLTWGTHPGTAIAVDAPIPAANDAAAQKGLDYMKFEAGHALAGTPVDVVFVGSCTNGRLSDMREVAQVLRGRRVAAGVRMLVVPGSEIVKRDAEAEGIHDIVRAAGAEWREPGCSMCIAMNGDLVAPGQLAVSTSNRNFEGRQGPGSRTLLATPLSAAWAAVNGKVADVRELFDQEVA*