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SCNpilot_cont_1000_p_scaffold_1360_29

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(31860..33440)

Top 3 Functional Annotations

Value Algorithm Source
Putative type II secretion system protein n=3 Tax=Bordetella bronchiseptica RepID=K0MRV5_BORBM similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 381.0
  • Bit_score: 396
  • Evalue 5.50e-107
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 381.0
  • Bit_score: 396
  • Evalue 1.70e-107
Pilus (MSHA type) biogenesis protein MshL {ECO:0000313|EMBL:KDD62295.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 381.0
  • Bit_score: 396
  • Evalue 7.70e-107

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1581
ATGAATCCCAACGCCCGCACCGCCCGCGTCCCACGCCGCCCCACGGTCAGAACGCTCGTCAGCGCGATCGGCGCGTTGGCGCTGACCGCCTGCAGCAACATGCCGCCACGCAGCGTCCAGGAACTCCCGCCGACCGAGTACAAGGCGCTCGAACGCAGCGGCAACGCCATCGTCGAGGAATCCAGGAAGCTCGCCAGCCAGCAGGACCGCATGCGCGAACAGGTCGAGCAGCGCCTGCAGCAGCAGGCAGACGCCGTCGCGCCGGTGGCGCCGGCCTACGACCCGCTGGAAAACACCGTGGTCAGCATCAGCATGTTCAACGCCGACGTCGGCCAGCTGCTGTGGGCGCTGGCCGACGAGCTGAAGATGAACCTGATCGTCGACCCGCAGGTGCTGGAGCAGCGCCAGCGCACCAGCCTGCACCTGCGCAACGTCAGCGCACGCGGCGGCGGCGGCCAGTCGCTGCGCGGCACGCTCACCATGAGCGGCAGCGTCGGCAAGGACAACGACCCCTACAAGCAGCTGGACGCCGCGATCAAGGTGATCCTGGGCAGCGACGAACAGGCCACCACCGCGCGTGGCCCGGATGCGCCGCCGGCGCCGGAAAAGAGCCGCTACAGCCTGGATCCCAGCTCCGGCACGCTGTTCGTCCGCGCCCGCCCGTCGCAGATCCGCGCGGTGGAGGAGCTGGTCGGCCACACCACCAGCAAGATGCGCCGCCAGGTCCTGGTCGAAGCGCAGATCCTGGACGTGTCGCTCAACGACAACTTCCAGTACGGCGTGGACTGGAACCTGCTGCGCAACCGCGTGGCCGGCATCTACGGCGACAGCCCGGCCACCATCGCGCCGCTGCCCGGCACGCCCGCCAATCCCGACCTCGGCATCCCGGAAAACCCCAACCTGCTGCCCTACCAGCGCTATGGCCGCTATGGCGACCAGGCCCGCAACATCATCTTCCCCAACCAGACGCTGGGCTCGGTGGCCGGGCGCGGGCTGGGCATCAGCTACCTGACGGACACCTTCTCGGCCGCGCTCAACGCGCTGCGCACCTTCGGCAACGTCAAGGTGCTGTCCAACCCCAGCGTGCGCGTGCGCAACGGCAGCCCGGCCTACCTGAGCGTGGGCTCCAACATCCGCTACGTCACCAAGTCCACCAGCAACTTCTCCAACACCGGCGGCGGCAGCGCCTACAACCAGTCCACCGACATCCAGACCGATTCGCTGTTCTCCGGCGTGGTGATCGGCGTGGCCCCGGTCGTGCACGACAACGGCGGCGTCGAACTGCTGGTGCACCCGATGCAGACCGAAGTGGTCCCCGGCAGCCTGGAACTGCAGAAGTTCCCCAACGGCAACGCCGTCACCCTGCCGGTGGTCAACGTCAAGGGCATCACCACCACGCTCAACCTGCGCGATGGCGACACCGTGCTGCTCGGCGGCCTGATCGACCAGAAGGCCAACCTCAACGACAGCGGCATCCCCGGCCTGTCCGACGTGCCGGCCTTCGGCAAGCTGTTCGGCTCGCGCGCCAAGCAGCAGAGCACCCGCGAACTGGTGCTGGTGCTGCGGGTGAAGGTGATATGA
PROTEIN sequence
Length: 527
MNPNARTARVPRRPTVRTLVSAIGALALTACSNMPPRSVQELPPTEYKALERSGNAIVEESRKLASQQDRMREQVEQRLQQQADAVAPVAPAYDPLENTVVSISMFNADVGQLLWALADELKMNLIVDPQVLEQRQRTSLHLRNVSARGGGGQSLRGTLTMSGSVGKDNDPYKQLDAAIKVILGSDEQATTARGPDAPPAPEKSRYSLDPSSGTLFVRARPSQIRAVEELVGHTTSKMRRQVLVEAQILDVSLNDNFQYGVDWNLLRNRVAGIYGDSPATIAPLPGTPANPDLGIPENPNLLPYQRYGRYGDQARNIIFPNQTLGSVAGRGLGISYLTDTFSAALNALRTFGNVKVLSNPSVRVRNGSPAYLSVGSNIRYVTKSTSNFSNTGGGSAYNQSTDIQTDSLFSGVVIGVAPVVHDNGGVELLVHPMQTEVVPGSLELQKFPNGNAVTLPVVNVKGITTTLNLRDGDTVLLGGLIDQKANLNDSGIPGLSDVPAFGKLFGSRAKQQSTRELVLVLRVKVI*