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SCNpilot_cont_1000_p_scaffold_1739_27

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 24418..25674

Top 3 Functional Annotations

Value Algorithm Source
RNA helicase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037855EE similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 425.0
  • Bit_score: 473
  • Evalue 2.80e-130
  • rbh
RNA helicase {ECO:0000313|EMBL:AJC46963.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 425.0
  • Bit_score: 472
  • Evalue 8.70e-130
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 418.0
  • Bit_score: 446
  • Evalue 8.80e-123

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCCCTTTTCCCGACTCGGCCTGTCTCCCTACGTACTGCCCGCGCTGGCACGCGCGCTGCGGCAGGCCGGCTACGGCGCCCCCACGCCGATCCAGCAGCAGGCGGTGCCGGTGCTGCTGCAGGGCCGGGACGTGGTGGCGCTGGCCCCGACCGGTTCGGGCAAGACCGCCGCCTACGTGCTGCCGGCGCTGCAGCGGTTCGCCATGGCCACGGCGCGCAGGCCGCGGGAGCTGCGGCAACTGGTACTGGTGCCCACGCGCGAGCTGGCGCTGCAGGTGGCCGACGTGTTCGCCACGCTCGGCCGGGAGCTGCCGCGGCAACCGCGGGTGGTGTGCGCGGTGGGCGGGGTGTCGATCAATCCGCAGATGATGGCGCTGCGCGGTGGGGCCGACGTGGTGGTGGCCACGCCCGGGCGCCTGCTCGATCTGCTGGCGCACAACGCGTTGTCGCTGCGCCAGGTGCAGCTGCTGGTGCTGGACGAGGCCGACCGGCTGCTGGAGCTGGGCTTCGGCGACGAGGTGCGGCGGATCCTTGCCGGACTGCCCGCGCAGCGGCAGACGGCGTTGTTCTCGGCCACCTTCCCCGACCAGATCGAGGCATTGGCGGCGGCCGGCCTGCGCGCGCCCGCGCGCCTGCAGGTCGATGCGCAGGCGCCCGCGCAGATCGAGCAGCGCGCGCTGCGGGTCGATGGCGAGCGCCGCGTCGAACTGCTGCTGTCGCTGCTGCGCGATCCGCGCTGGCGGCAGGTGCTGGTGTTCGTCGCCAGCATCCGCGAGGGCGACCGCCTGGCCGGCGCGCTGCGCGGGCAGGGCATCGCCGCGCAGGCGCTGCATGGCGACCTGTCGCAGGGCCGCCGCGTGCGCACCCTGCAGGCGTTCAAGGAGGGCCAGCTGCAGGTGCTGGTGGCGACCGACGTGGCCGCGCGCGGCATCGACATCGCCGGCCTGCCGGTGGTGGTGAACCATGCGTTGCCGCGTTCGCCGGCCGATTACCTGCACCGCATCGGCCGCACCGGCCGTGCCGGCAGCCCCGGACTGGCGGGGAGCCTGGTCGAGGCCGCGGCGCTGGCGCACTGGCGGTTGATCTGCAGGCGCCATGGCCTGCGCCTGGAGCCGGAGGTGGTGTCGGGTTTCGAGCCGACCGGGGCGGCACCGGCCGCAGCGCCGGCAGGCGATGGCAAAGGCGGCATCAAGGGGCGCCGGCCGAGCCGGAAGGACCGGCTGCGCGCCGCGGCGGCGGGCACGCCGGCCGGTTGA
PROTEIN sequence
Length: 419
MPFSRLGLSPYVLPALARALRQAGYGAPTPIQQQAVPVLLQGRDVVALAPTGSGKTAAYVLPALQRFAMATARRPRELRQLVLVPTRELALQVADVFATLGRELPRQPRVVCAVGGVSINPQMMALRGGADVVVATPGRLLDLLAHNALSLRQVQLLVLDEADRLLELGFGDEVRRILAGLPAQRQTALFSATFPDQIEALAAAGLRAPARLQVDAQAPAQIEQRALRVDGERRVELLLSLLRDPRWRQVLVFVASIREGDRLAGALRGQGIAAQALHGDLSQGRRVRTLQAFKEGQLQVLVATDVAARGIDIAGLPVVVNHALPRSPADYLHRIGRTGRAGSPGLAGSLVEAAALAHWRLICRRHGLRLEPEVVSGFEPTGAAPAAAPAGDGKGGIKGRRPSRKDRLRAAAAGTPAG*