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SCNpilot_cont_1000_p_scaffold_2916_12

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 12620..13297

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 242.0
  • Bit_score: 399
  • Evalue 2.30e-108
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 240.0
  • Bit_score: 396
  • Evalue 5.60e-108
  • rbh
ribonuclease PH n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031219A7 similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 242.0
  • Bit_score: 406
  • Evalue 2.30e-110
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGACCTTTTCCCGTCCCAGCGGCCGCCAGGCCGACCAGCTGCGCAGCGTCACCCTCCACACCCGTGTGCTGTGCACCGCCAGCATCGAAAACCGCGTGCCGGCGTTCCTGCGCGGCAAGGGCGAAGGCTGGGTGACCGCCGAGTACGGCATGCTGCCGCGCTCCACCCACACCCGTTCCGACCGCGAGGCCGCACGCGGCAAGCAGGGCGGACGCACGCTGGAGATCCAGCGCCTGATCGGCCGCACCCTGCGCGCGTGCATCGACCGCAACGCGCTGGGCGAACGCACCATCACCCTGGACTGCGACGTGCTGCAGGCCGACGGCGGCACCCGCACCGCCGCCATCACCGGTGCCTACGTGGCCCTGGTGGATGCGGTGAACACGCTGCTCAAGCGCGGCGAGATCAAGCGCAACCCGGTGTTCGGCGCGGTTGCCGCGGTGTCGGTCGGGGTCTACAAGGGCGTGCCGGTACTGGACCTGGACTACGCCGAGGACAGCGACTGCGACACCGACATGAACGTCGTCATGAACGATGGCGGCGGTTTCATCGAGCTGCAGGGCACCGCCGAAGGCCATGCCTTCCGCCGCGATGAGCTGGATGCGCTGCTGGCACTGGCCGAAAAGGGCATCGGCGAACTGTTCGCCGCACAGCAGGCCGCCCTGGCGCAGGCATGA
PROTEIN sequence
Length: 226
MTFSRPSGRQADQLRSVTLHTRVLCTASIENRVPAFLRGKGEGWVTAEYGMLPRSTHTRSDREAARGKQGGRTLEIQRLIGRTLRACIDRNALGERTITLDCDVLQADGGTRTAAITGAYVALVDAVNTLLKRGEIKRNPVFGAVAAVSVGVYKGVPVLDLDYAEDSDCDTDMNVVMNDGGGFIELQGTAEGHAFRRDELDALLALAEKGIGELFAAQQAALAQA*