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SCNpilot_cont_1000_p_scaffold_3302_7

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(6798..8081)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003057D4B similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 427.0
  • Bit_score: 672
  • Evalue 2.50e-190
  • rbh
Membrane protein {ECO:0000313|EMBL:AHY59621.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 427.0
  • Bit_score: 675
  • Evalue 5.30e-191
putative transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 423.0
  • Bit_score: 648
  • Evalue 2.00e-183
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
GTGGCGCCGGCCGATCCGCGCCGCGCCCAGCTGCGCCGGCTCAAGCTGTACGCGCTGGCGATGCTGCTGGCGATGCTGGCCGGCTTCGTCCTCAGCCACCTCAATGGCGGGCACGGCGCCTGGGCATGGGTCGGCGCGTTCTGCGAGGCGGCCATGGTCGGCGCATTGGCCGACTGGTTCGCGGTGGTGGCGCTGTTCCGCCGCCCGTTGAACCTGCCCATCCCGCATACCGCCATCATCCCGCGCAGCAAGGCGCGCATCGCCGACAGCCTGGCGCTGTTCGTGCGCGACCACTTCCTCGAGCCGGAGGCGTTGCTGGCCAAGCTGAAGGTCTTCGACCCGGCCACGCGCCTGGGCCACTGGCTGGCGCAGCCGCAGCAGGCGCGGATGCTGTCCGGCATGGCACGCGGCTGGGCACTGCAGGCGCTGGACCTGCTGGATGAATCGGCCGTGCGCCGGGCCATCCAGGGCTTCGTGGTCGAACAGCTGCGGCAATGGAACGCCGCGGCCACCGCCGGCGATCTGCTCGGCCTGCTGACCGCCGACGACCGCCACCAGCGGGTGCTGGACGAGGGCCTGACCCGTATCGCCGGCTGGCTCGACAGCGACACCGTGCGCCAGCGCGCCTCGGCGCTGATCGTGCGCTACATCCGCAAGGAATGGCCGAAGCTGGCCAGCACCGTGGACTGGGTCAAACCGATCGACGAGATCGGCGATTCGCTCGCCGAGCGCATGGCCCGCGCCGGGCTGGACGAACTGCAGGCGATCCTGTCCGAACCCGGGCATCCGCTGCGCCAGGACTACGCACGCTGGCTGGGCGGCTACCTGCAGCGGCTGCGCGACGATCCCGCACTGGCCGCGCGGGTGGACGCGCTCAAGCAGCAGGTGATCGACCACCCGGCCGTGCAGGACTACGTGCAGGGCCTGTGGCAGCGCATCCACCAGCAGTTGCGCGACGACCTGTCGCGCGAGGAGTCGGTGCTGGCCGCGCACCTGGAACGCAACCTCGGCAAGCTCGGTGCCACCATCGGCCGCGACCCGGCGCTGCGCGATGCGCTCAACCAGCACATGCTGGCCGGTGCCGAACGGCTCACCACGCGCCTGCGCAGCGGCGTGACCACGCATATCGCGCAGACGCTCAAGGCCTGGGACGAGCGCAAGCTGGTCGAGCAGCTGGAACTCAGCGTGGGTCGCGACCTGCAGTACATCCGCTTCAACGGCACCCTGGTCGGCGGCCTGATCGGCCTGCTGCTGCATGCGCTGACCGTCTGGCTGCGCTTCTGA
PROTEIN sequence
Length: 428
VAPADPRRAQLRRLKLYALAMLLAMLAGFVLSHLNGGHGAWAWVGAFCEAAMVGALADWFAVVALFRRPLNLPIPHTAIIPRSKARIADSLALFVRDHFLEPEALLAKLKVFDPATRLGHWLAQPQQARMLSGMARGWALQALDLLDESAVRRAIQGFVVEQLRQWNAAATAGDLLGLLTADDRHQRVLDEGLTRIAGWLDSDTVRQRASALIVRYIRKEWPKLASTVDWVKPIDEIGDSLAERMARAGLDELQAILSEPGHPLRQDYARWLGGYLQRLRDDPALAARVDALKQQVIDHPAVQDYVQGLWQRIHQQLRDDLSREESVLAAHLERNLGKLGATIGRDPALRDALNQHMLAGAERLTTRLRSGVTTHIAQTLKAWDERKLVEQLELSVGRDLQYIRFNGTLVGGLIGLLLHALTVWLRF*