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SCNpilot_cont_1000_p_scaffold_3881_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(2..340)

Top 3 Functional Annotations

Value Algorithm Source
glycine/betaine ABC transporter permease n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036CD88E similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 113.0
  • Bit_score: 203
  • Evalue 8.50e-50
Glycine/betaine ABC transporter permease {ECO:0000313|EMBL:AJC47251.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 113.0
  • Bit_score: 200
  • Evalue 1.00e-48
opuD2; putative glycine betaine transporter 2; K05020 glycine betaine transporter similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 113.0
  • Bit_score: 198
  • Evalue 1.50e-48

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGGTGTTTCGTGTTTCCATCGCGCTGGTCGCCGCACTGGTGCTGCTGGCCGGCCTCGCCCCCGGCCCGTTCAACGACGTGGTGCAGGCCGCGCTGGCCGAGGTCGTGCGCAGCGTCGGCTGGCTGTACCTGCTGATCGTGTTCCTGACGCTGAGCTTCCTGCTGTACCTGGCGTTCGGCCGCTTCGGCACCCTGCGCATCGGCGGCGAGGACGCCGAGCCGGATTTCTCGCGCGCCAGCTGGCTGGCGATGCTGTTCGCCACCGGCATGGGCATCGGCCTGGTGTTCTGGGGCGCGGCCGAGCCGATCTCGCATTTCGCCACGCCGCCCGAAGGGCTG
PROTEIN sequence
Length: 113
MVFRVSIALVAALVLLAGLAPGPFNDVVQAALAEVVRSVGWLYLLIVFLTLSFLLYLAFGRFGTLRIGGEDAEPDFSRASWLAMLFATGMGIGLVFWGAAEPISHFATPPEGL