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SCNpilot_cont_1000_p_scaffold_5763_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 1542..2987

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4 domain-containing protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 515.0
  • Bit_score: 789
  • Evalue 8.30e-226
  • rbh
RNA-binding S4 domain protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SPX1_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 515.0
  • Bit_score: 789
  • Evalue 2.70e-225
  • rbh
RNA-binding S4 domain protein {ECO:0000313|EMBL:ACF52391.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 515.0
  • Bit_score: 789
  • Evalue 3.70e-225

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
ATGAGTGACACCCCCCGCAAGCCGTCGTTGAACAAGCTCTCGCTCAAGCGCGAAGCCGCTGTCGAGCAGCCCCGGCTGGAAGAACGCCTGCACAAGGTCCTGGCCCAGGCCGGCCTGGGCTCGCGCCGCGCGCTGGAGCAGCGCATCGCCGACGGCCTGGTCAAGGTCAACGGCGAGACCGCGCAGACCGGCATGTCGGTCAAGAGCGGCGACAAGATCGACCTCGACGGCCGCAGCTTCGTCGCCAGCGCGCTGACCGACCCGTCGCGCGTACTGGTCTACAACAAGCCCGAAGGCGAAGTGACCACCCGCGAGGACCCCGAAGGCCGCCCGACCGTGTTCGAGTCGCTGCCGCCGCTCAAGGGCGCGCGCTGGATCGCCATCGGCCGCCTGGACATCAACACCACCGGCCTGCTGCTGCTCACCACCGACGGCGAACTGGCCAACGCCATGATGCACCCGTCGTTCGAGGTCGAGCGCGAGTACGTGGTGCGCGTGCGTGCCCCGGAAGGCCAGGAAAAGGTGCCGGACAACGTCGTCGACCGCCTCGCCCGCGGCGTCGCGCTGGAAGACGGCCCGGCCAAGTTCGACGAGATCGAACGCATCGGCGGCACCGACTCGCATGACTGGTTCCGGGTGGTGGTCAAGGAAGGCCGCAACCGCGAAGTGCGCCGCCTGTGGGAATCGCAGGGCTGCCAGGTCAGCCGCCTCAAGCGCACCCGTTACGGCAAGGTCGAACTGCCGCGCGAATTGCTGCGCGGGCAGTCGGTGGAACTGCCCAATGCCCAGGTCGAGGCGCTGCGCGCCGAGCTGAAGCTGGAAGAAGGCGCGCCGTCGGCGCTGACCCTGCAGCCGGTGATCGGCCAGCGCAAGGCGGCCAAGACCACCGTGCGCGTGCGCGAAGGCGGCCGCGGCAATGCCTACGTCAACGGCCACAACACCGCCGACGAAGGCCGCGAACTGCGCCGCTTCGACACCCTGCGCGAAGACCGCGGCCGTGGCCGCGGTGGCAAGGGCGGCGGCTTCAAGGGCGGCCTGACCGTCAGCGGCGAAGCGGCGGCCAAGCAGTCGCAGAAGCCGTTCAAGCAGCGCAAGCCCAAGGGCGACCGCAGCCTGCCGGAAGGCAATACCGCCGCATTCCGCACCCGGTACGTGCCCGAAGGCGTGAGCACCGGGCCCAGCGGCCACCGCAACGCCGGTCCGTCCGGCAACCGCGGCCCCGGCCGTGGCCCGGCCGGCGAAGGCCAGGGCCGCCCGTACGGCAAGCCGCGCCCGGGTGCCGGCGGCGCCGGGCGCTCCGGCAGTGGCCACAACCGTCCTTCCGGCGCGCCGCGCGGCGGCAACCGTCCCGGCGGCAGCGGCCGTCCGGCGGGCCGCCCGGGCGGTGGTCGTCCCGGCGGTGGTGGTCGTCCCGGCGGCGGCGGTCGCGGGCCGCGCGGCGGCTGA
PROTEIN sequence
Length: 482
MSDTPRKPSLNKLSLKREAAVEQPRLEERLHKVLAQAGLGSRRALEQRIADGLVKVNGETAQTGMSVKSGDKIDLDGRSFVASALTDPSRVLVYNKPEGEVTTREDPEGRPTVFESLPPLKGARWIAIGRLDINTTGLLLLTTDGELANAMMHPSFEVEREYVVRVRAPEGQEKVPDNVVDRLARGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRTRYGKVELPRELLRGQSVELPNAQVEALRAELKLEEGAPSALTLQPVIGQRKAAKTTVRVREGGRGNAYVNGHNTADEGRELRRFDTLREDRGRGRGGKGGGFKGGLTVSGEAAAKQSQKPFKQRKPKGDRSLPEGNTAAFRTRYVPEGVSTGPSGHRNAGPSGNRGPGRGPAGEGQGRPYGKPRPGAGGAGRSGSGHNRPSGAPRGGNRPGGSGRPAGRPGGGRPGGGGRPGGGGRGPRGG*