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SCNpilot_cont_1000_p_scaffold_5570_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(884..1471)

Top 3 Functional Annotations

Value Algorithm Source
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 193.0
  • Bit_score: 199
  • Evalue 8.80e-49
2''''-5'''' RNA ligase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B322B6 similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 193.0
  • Bit_score: 214
  • Evalue 8.40e-53
2'-5' RNA ligase {ECO:0000313|EMBL:KHM93482.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 193.0
  • Bit_score: 205
  • Evalue 7.10e-50

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Taxonomy

Xanthomonas vesicatoria → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGACGAAGTTCATTCCCTCCGCCGAGGCGCAACTGTCGCTGGGTCTCGGCAGCGACATTCCCACCGAGCGCCTGTTCTTCGCGGTGATGCCCGATCCGGCCACGGCCTGGCGTATCGCCGAACTGGCCGAGGGACTGCGTGCCGAACATGGCCTGGACGGGCGTCCGCTGGCGCGCGAACGCCTGCATGTCACCCTGCATCACCTGGGCGATTACGCCGGCCTGCCACCGAGCCTGCTGGCGAAGGTGCAGCAGGCCGCGGCGCGGGTGCGCATGCCGGAATTCGAAGTGTGTTTCGATGAAGTCGGCAGCTTCGCCGGCGGCCGCCAGCATCCGTTCGTGCTGCGCAGCGAGCATGGCGCCGACCTGCTGCAGGGCCTGCACCAGGAGCTCGCGCGCTGTCTGCAGGCCATCGGCAGCCGCCCGGATCCGGGGTTCACGCCGCACCTGACCCTGCTCTACGACAAGCGACGCCTGCCGGTACAGCCGGTGCAGCCGATGCGCTGGCTGGTGCGCGAGTTCGTGCTGATCCGCAGCTACCTGGGTCAGACCCGCTACCAGATGGAAGGGCGCTGGAGCCTGGGCTGA
PROTEIN sequence
Length: 196
MTKFIPSAEAQLSLGLGSDIPTERLFFAVMPDPATAWRIAELAEGLRAEHGLDGRPLARERLHVTLHHLGDYAGLPPSLLAKVQQAAARVRMPEFEVCFDEVGSFAGGRQHPFVLRSEHGADLLQGLHQELARCLQAIGSRPDPGFTPHLTLLYDKRRLPVQPVQPMRWLVREFVLIRSYLGQTRYQMEGRWSLG*