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SCNpilot_cont_1000_p_scaffold_5570_8

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 5708..6289

Top 3 Functional Annotations

Value Algorithm Source
Small-conductance mechanosensitive channel n=2 Tax=Stenotrophomonas RepID=B8L6N5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 193.0
  • Bit_score: 266
  • Evalue 2.40e-68
Uncharacterized mscS family protein {ECO:0000313|EMBL:CCP12745.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 193.0
  • Bit_score: 266
  • Evalue 3.40e-68
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 193.0
  • Bit_score: 261
  • Evalue 1.90e-67

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAAAAACTACCTGCCCGAATGGATGCACGGATGGATCAACCTGCTCGACACCGCGCTGGTCGTCATCCTGATCCTGCTGGTGGCATGGCTGCTGCGCCTGCTCACCCGGCGCCTGCTGGCGCGCCTGGGCATGCACTACACGCTGCCGCCGCAGGTGGAAACCGCGGCCCGGCGGCTGTCCAACTTCGTGATCGGCAGCGCCGCGCTGGTGGCCATCCTCGACCAGCTCGGGGTATCGCCGACCATCCTGTGGACCGCGTTCACCGGTTTCGCCGCGGTCGGCGCGGTGGCGTTCTTCGCCGCCTGGAGCGTGCTGTCCAACATCTTCTGCGCGCTGCTGATCTTCACCACCCGGCCGTTCCGCCTCGGCGACCGCATCGAACTGCTGGAGAACGGCGAAAAGCCCGGGCTGAAGGGCCAGGTGATCGACATCAACCTGATCTACACCACGCTGCAGGAAATCGGCGGCCCGGCCGAAGGCACGCTGATGCAGATCCCCAACAGCCTGTTCTTCCAGCGCGGGCTGCGCCGCTGGCCGGCCACCGCCGCCCAGGCGCACGTGATCCAGGGCGACGGCTGA
PROTEIN sequence
Length: 194
MKNYLPEWMHGWINLLDTALVVILILLVAWLLRLLTRRLLARLGMHYTLPPQVETAARRLSNFVIGSAALVAILDQLGVSPTILWTAFTGFAAVGAVAFFAAWSVLSNIFCALLIFTTRPFRLGDRIELLENGEKPGLKGQVIDINLIYTTLQEIGGPAEGTLMQIPNSLFFQRGLRRWPATAAQAHVIQGDG*