ggKbase home page

SCNpilot_cont_1000_p_scaffold_6215_7

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(6308..6976)

Top 3 Functional Annotations

Value Algorithm Source
amino acid permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D8772D similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 220.0
  • Bit_score: 410
  • Evalue 1.50e-111
Amino acid permease {ECO:0000313|EMBL:AHY59185.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 220.0
  • Bit_score: 410
  • Evalue 1.70e-111
Amino acid transporters; K03294 basic amino acid/polyamine antiporter, APA family similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 220.0
  • Bit_score: 401
  • Evalue 2.30e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
GAATCGCACCGCCCGCAGCGCGACCTGCCGATCGGCATGCTGCTGTCGCTGGTGATCTGCACCGTGCTGTACATCGCCATGGCCGCGGTGATGACCGGCCTGGTCCCGTACAAGCTGCTGGGCACCGCCGAGCCGGTGGTGACCGCGGTCGCCGCGCATCCGCAGCTGGACTGGCTGCGCATCATCGTCGAGATCGGCGCCTTGATCGGCCTGTCCTCGGTGGTGCTGGTGATGGTGATCGGCCAGCCGCGCATCTTCATGATCATGGGCCGCGACGGCCTGCTGCCGCCGGTGTTCACCAGGATCCACCCCAAGTACCGCACGCCGCACATCAACACGGTGATCACCGGCATCGGCATCGCCCTGCTCGCCGCGCTGTTCCCGCTGGACATCCTCGGCGAACTGACCTCGATGGGCACCCTGATCGCCTTCGCCGCGGTCTGCGCCGGCGTGCTGGTCCTGCGCCGCACCCAGCCGGACCTGCCGCGCCCGTTCCGCATCCCGATGGCCTGGTTGATCTGCAGCCTCGGCGTGCTCAGCTGCATCGCACTGCTGACCGCCATGACCCTGCACAACTGGATGCTGATGGGCCTGTGGACCGCCACCGGCTTCATCATCTACTTCGCCTACGGCATGCGCCACAGCAAGCTGGGCGGCCGCAACGGCTGA
PROTEIN sequence
Length: 223
ESHRPQRDLPIGMLLSLVICTVLYIAMAAVMTGLVPYKLLGTAEPVVTAVAAHPQLDWLRIIVEIGALIGLSSVVLVMVIGQPRIFMIMGRDGLLPPVFTRIHPKYRTPHINTVITGIGIALLAALFPLDILGELTSMGTLIAFAAVCAGVLVLRRTQPDLPRPFRIPMAWLICSLGVLSCIALLTAMTLHNWMLMGLWTATGFIIYFAYGMRHSKLGGRNG*