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SCNpilot_cont_1000_p_scaffold_3674

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3674_1
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..538)
DNA (537bp) protein (179aa)
ribonucleoside-diphosphate reductase, alpha subunit; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Ribonucleoside-diphosphate reductase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5X9_CELGA
SCNpilot_cont_1000_p_scaffold_3674_2
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(535..930)
DNA (396bp) protein (132aa)
Protein NrdI n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHT8_CELFN
NrdI protein; K03647 protein involved in ribonucleotide reduction
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_3674_3
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1161..1406)
DNA (246bp) protein (82aa)
Glutaredoxin-like protein NrdH n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2Z7_CELFA
glutaredoxin-like protein NrdH; K06191 glutaredoxin-like protein NrdH
Glutaredoxin {ECO:0000313|EMBL:KGM00734.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
SCNpilot_cont_1000_p_scaffold_3674_4
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1875..3677)
DNA (1803bp) protein (601aa)
AAA ATPase central domain protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHT5_CELFN
AAA ATPase
AAA ATPase central domain protein {ECO:0000313|EMBL:ADG73359.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_3674_5
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3824..5128)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B3BE5D
Putative transporter {ECO:0000313|EMBL:KJL22232.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transporter
SCNpilot_cont_1000_p_scaffold_3674_6
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(5135..6028)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BDB5A rbh
RpiR family transcriptional regulator rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_cont_1000_p_scaffold_3674_7
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6169..7743
DNA (1575bp) protein (525aa)
ABC transporter substrate-binding protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B5034B rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYT60384.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_1000_p_scaffold_3674_8
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7763..8791
DNA (1029bp) protein (343aa)
ABC transporter permease n=1 Tax=Agromyces subbeticus RepID=UPI0003B33C9C rbh
ABC transporter permease {ECO:0000313|EMBL:EQM86053.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
binding-protein-dependent transporter inner membrane component; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_cont_1000_p_scaffold_3674_9
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8788..9693
DNA (906bp) protein (302aa)
Glutathione ABC transporter permease GsiD n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L188_9MICO rbh
Glutathione transport system permease protein GsiD {ECO:0000313|EMBL:KJL22236.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
binding-protein-dependent transporter inner membrane component; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_cont_1000_p_scaffold_3674_10
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9690..10592
DNA (903bp) protein (301aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="M
glucokinase regulatory-like protein; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] rbh
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L657_9MICO rbh
SCNpilot_cont_1000_p_scaffold_3674_11
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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10743..11546
DNA (804bp) protein (268aa)
hypothetical protein; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] rbh
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PVR0_STANL rbh
SCNpilot_cont_1000_p_scaffold_3674_12
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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11543..12031
DNA (489bp) protein (163aa)
N-acyltransferase YncA {ECO:0000313|EMBL:KJL22239.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJL22239.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034AA9D9
beta-lactamase
SCNpilot_cont_1000_p_scaffold_3674_13
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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12028..13104
DNA (1077bp) protein (359aa)
muconate cycloisomerase n=1 Tax=Agromyces subbeticus RepID=UPI0003B42E8E
Muconate cycloisomerase {ECO:0000313|EMBL:EYT60378.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
mandelate racemase/muconate lactonizing protein
Displaying 13 items

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