ggKbase home page

SCNpilot_cont_1000_bf_scaffold_41_15

Organism: SCNPILOT_CONT_1000_BF_Sphingobacteriales_50_17

near complete RP 49 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 18145..19218

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL15_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 336.0
  • Bit_score: 262
  • Evalue 8.40e-67
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 336.0
  • Bit_score: 262
  • Evalue 2.60e-67
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW00854.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 336.0
  • Bit_score: 262
  • Evalue 1.20e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1074
TTGAACAAAGATCTACATACCGACCCCGGAGGCCCTCACGGCATCCATGAAGACCTGCTGGTAAAATACCTGCTGGGCGAAACATCCCCCGATGACAACGCCCGCGTAGAAGCCTGGCTGGCTGCCGATCCCGCCAACAGGCATTTCTATGACCACTTCCAGCTCATCTGGCGTGAAAGCCGCCGCCTGAACGACGATTTCACCACGACGGACGAACAGACAGACGCCGCCTGGCAGAAATTCCGTCAAAAAATACAACGACCCGTTCCAAAACGAACCGGAGGTTCGTTGTCCGAAGGACAGACATTAGATATGCAGGCCGTAAAAACCACCCCCGGCCAAAGACCCCGGACTGCCTGGGTCACTCGGACCATCTGGACAAAGTCAGCAGCGGCTATCCTCCTGGTAGTTTCCATTGCGGGAATTATCTATCTCATAAAAGGTCCAGCCCCCGACAGACTGGTCGCCAGCACAACAACCCCGCTCACCGACACCCTGCCGGACGGGTCGTTCATTACCCTTAACAAACGATCCGATATCCGCTACCCGGCAAACTTTAAAAAACAACGTGCCGTACACCTGTTAAAAGGAGAGGCCTTTTTCAAAATAGCACCCGACAAAGAAAAACCGTTCAAAGTATACGCAGACAATGTCACCATCACGGTCCTGGGCACCTCATTCGATGTGCGCAACAACGGGAACACCACTGAGATCATTGTTGAGTCCGGGCTGATCCGTGTGACAGACTCACTCCACGATATTCTTGTACATCCATCGGAGAAACTGATCCTGCATAAGGGAGACACTTCCCTGACAAAGGAAGAGACAACGAGCCAGCTATACAAATACTATCGCACAAAAGAGTTCGTTTGCGACAACACCCCGCTCGCCCAACTGGCTGCTTCACTGGAAGAAGCCTACGATGTGAAGATCGTGGTCGATCCTTCCCTGCGCCAATTGCAGATCAACACCGTATTTCGCAACCTACCCCTGAAACAGATATTAAACATCATACAAGAAACATTCGGCATCAGGGTCAATCACTCTGGCAGCCAGTACACTTTACAACCATAA
PROTEIN sequence
Length: 358
LNKDLHTDPGGPHGIHEDLLVKYLLGETSPDDNARVEAWLAADPANRHFYDHFQLIWRESRRLNDDFTTTDEQTDAAWQKFRQKIQRPVPKRTGGSLSEGQTLDMQAVKTTPGQRPRTAWVTRTIWTKSAAAILLVVSIAGIIYLIKGPAPDRLVASTTTPLTDTLPDGSFITLNKRSDIRYPANFKKQRAVHLLKGEAFFKIAPDKEKPFKVYADNVTITVLGTSFDVRNNGNTTEIIVESGLIRVTDSLHDILVHPSEKLILHKGDTSLTKEETTSQLYKYYRTKEFVCDNTPLAQLAASLEEAYDVKIVVDPSLRQLQINTVFRNLPLKQILNIIQETFGIRVNHSGSQYTLQP*