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AMDSBA1_74

Alias: AMDSBA1_C73

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA1_74_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..202
-----------------
DNA (201bp)
protein (67aa)
transposase mutator type
Transposase n=8 Tax=Sulfobacillus acidophilus RepID=F8I751_SULAT (db=UNIREF evalue=2.7e-23 bit_score=112.8 identity=84.8 coverage=97.01492537313433)
(db=HMMPfam db_id=PF00872 from=2 to=66 evalue=8.5e-10 interpro_id=IPR001207 interpro_description=Transposase, mutator type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
AMDSBA1_74_2
RLO_PLX_64_10, Bacteria

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comp(1593..2351)
-----------------
DNA (759bp)
protein (253aa)
short chain dehydrogenase
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Natronobacterium gregoryi SP2 RepID=G4GBT8_9EURY (db=UNIREF evalue=9.0e-27 bit_score=126.3 identity=34.8 coverage=94.86166007905138)
ADH_SHORT (db=PatternScan db_id=PS00061 from=139 to=167 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=243 evalue=2.9e-87)
AMDSBA1_74_3
Bacillus amyloliquefaciens, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2348..3364)
-----------------
DNA (1017bp)
protein (339aa)
hypothetical protein
Alcohol dehydrogenase n=2 Tax=Paracoccidioides brasiliensis RepID=C0S6Z5_PARBP (db=UNIREF evalue=7.1e-11 bit_score=73.9 identity=27.3 coverage=55.75221238938053)
GroES-like (db=superfamily db_id=SSF50129 from=1 to=168 evalue=2.8e-41 interpro_id=IPR011032 interpro_description=GroES-like)
no description (db=Gene3D db_id=G3DSA:3.90.180.10 from=1 to=181 evalue=1.4e-40)
AMDSBA1_74_4
MPF_Thermotogae_50_1627, Thermotogales, Thermotogae, Thermotogae, Bacteria

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comp(3410..4036)
-----------------
DNA (627bp)
protein (209aa)
2-keto-3-deoxy-phosphogluconate aldolase (EC:4.1.2.14)
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2D171_LACBR (db=UNIREF evalue=2.0e-27 bit_score=128.3 identity=32.6 coverage=89.95215311004785)
seg (db=Seg db_id=seg from=169 to=179)
Aldolase (db=superfamily db_id=SSF51569 from=1 to=205 evalue=4.2e-46)
AMDSBA1_74_5
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(4039..5481)
-----------------
DNA (1443bp)
protein (481aa)
xylulokinase
Xylulose kinase n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7Z6_9BURK (db=UNIREF evalue=3.2e-33 bit_score=148.7 identity=28.8 coverage=88.35758835758836)
seg (db=Seg db_id=seg from=211 to=222)
seg (db=Seg db_id=seg from=358 to=369)
AMDSBA1_74_6
Candidatus Acidianus copahuensis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(5551..6567)
-----------------
DNA (1017bp)
protein (339aa)
D-mannonate dehydratase
Mannonate dehydratase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZJ0_THERP (db=UNIREF evalue=8.5e-81 bit_score=306.2 identity=45.1 coverage=96.7551622418879)
Mannonate dehydratase UxuA (db=HMMPIR db_id=PIRSF016049 from=1 to=333 evalue=4.7e-100 interpro_id=IPR004628 interpro_description=Mannonate dehydratase GO=Biological Process: glucuronate catabolic process (GO:0006064), Molecular Function: mannonate dehydratase activity (GO:0008927))
AMDSBA1_74_7
Egretta garzetta, Egretta, Pelecaniformes, Aves, Chordata, Metazoa

Not on your lists

comp(6631..7377)
-----------------
DNA (747bp)
protein (249aa)
glucose 1-dehydrogenase
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WB72_9CAUL (db=UNIREF evalue=9.8e-10 bit_score=69.7 identity=36.8 coverage=44.17670682730924)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=243 evalue=5.7e-42)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=3 to=243 evalue=1.5e-37 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
AMDSBA1_74_8
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7514..8464)
-----------------
DNA (951bp)
protein (317aa)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=12 to=271 evalue=1.5e-27)
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=30 to=216 evalue=2.9e-18)
no description (db=HMMSmart db_id=SM00849 from=27 to=229 evalue=2.0e-16 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
(db=HMMPfam db_id=PF00753 from=33 to=202 evalue=7.0e-15 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA1_74_9
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8652..9821
-----------------
DNA (1170bp)
protein (390aa)
ROK family transcriptional regulator
Putative uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D941_BRAJP (db=UNIREF evalue=6.9e-10 bit_score=70.9 identity=26.7 coverage=72.3076923076923)
seg (db=Seg db_id=seg from=305 to=318)
ROK (db=PatternScan db_id=PS01125 from=215 to=242 evalue=0.0 interpro_id=IPR000600 interpro_description=ROK)
AMDSBA1_74_10
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9936..10904
-----------------
DNA (969bp)
protein (323aa)
sugar ABC transporter substrate-binding protein
Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Mobiluncus mulieris RepID=C2KRR4_9ACTO (db=UNIREF evalue=1.5e-21 bit_score=109.4 identity=29.0 coverage=90.09287925696594)
seg (db=Seg db_id=seg from=201 to=212)
seg (db=Seg db_id=seg from=10 to=24)
AMDSBA1_74_11
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10948..11703
-----------------
DNA (756bp)
protein (252aa)
ABC transporter-like protein
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C4Z8K6_EUBR3 (db=UNIREF evalue=2.5e-21 bit_score=108.2 identity=32.4 coverage=81.74603174603175)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=7 to=247 evalue=2.4e-73)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=147 to=161 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
AMDSBA1_74_12
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11747..12820
-----------------
DNA (1074bp)
protein (358aa)
monosaccharide-transporting ATPase
Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S1S6_9CLOT (db=UNIREF evalue=5.5e-38 bit_score=164.1 identity=31.3 coverage=83.5195530726257)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
transmembrane_regions (db=TMHMM db_id=tmhmm from=181 to=203)
AMDSBA1_74_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13547..14764
-----------------
DNA (1218bp)
protein (406aa)
Integrase family protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 PF3_STRC2">RepID=B5GPF3_STRC2 (db=UNIREF evalue=4.1e-21 bit_score=108.2 identity=28.4 coverage=76.35467980295566)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=189 to=385 evalue=8.5e-41 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=192 to=384 evalue=6.0e-34 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
(db=HMMPfam db_id=PF00589 from=192 to=377 evalue=3.5e-30 interpro_id=IPR002104 interpro_description=Integrase, catalytic GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
Displaying 13 items

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