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AMDSBA1_7_18

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(20784..21818)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 339.0
  • Bit_score: 430
  • Evalue 6.30e-118
Transcriptional regulator n=1 Tax=Spirochaeta africana DSM 8902 RepID=H9UHX0_SPIAZ (db=UNIREF evalue=6.1e-26 bit_score=124.0 identity=30.3 coverage=94.4927536231884) similarity UNIREF
DB: UNIREF
  • Identity: 30.3
  • Coverage: 94.49
  • Bit_score: 124
  • Evalue 6.10e-26
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=4 to=22 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1035
ATGGCTACAATTCGTGATGTCGCTCATTTGGCGCAAGTATCGGTTTCCACCGTGTCACTCGTTTTAAGGCAACCTCACCGAGTTTCTCCCGAAACTCGCGAAAAGGTTGAAAAAGCCGTGCAGGAATTGCAATACCAGCCTAATGGCATTGCTCGCGACCTTAGAGTGCGCAAAACCAACACCATTGCGGTTCTGTTGCATAACTTAAGCGGTCCATTTTATTCCGAATTGATTCGCGGGGTGGAAGAAGCCGGTGAAAATCTTGGTTTTACCACACTGGCAGCCGGCAGCTCCAAAAGTCAAGATCAGGGATCGTTAAGACTCTTGCATGAAGGGCGGGTAGACGGCGCCATTGTCTTGGATCCCACCATCAGTTCGCCCGTGTTGCTGCGCTACGCCCGCAAAACACTCCCTATCGTCGTGTTGGACCGCGGACTCTCAGGGACACTGCAATCCGATTTCATTACCGCGGTGGGATCGGACCATGAATCTGGCGGATATTTAGCGGGAAAGCATTTGCTCACCCAAGGCTATCGGCGTTTTGCCCTCATTGCCGGACCCGTGGACTCAGAACACAGCCATTTGCGCGAAGTGGGTTTTTTTCGAGCACTGCAAGAAGAGCCAATCGATGTCACTACGATTCCCGTCGTCCACGGCGACTTTACCGAAATTGGCGGGGTACGCGCCATGACGATGTTGCTCGATCACGAGTGGTCTTTTGACGCTATCTTCTGCGCAAATGACGAGATGGCAATCGGAGCGATGCAAGTACTGGAAGAACGGCATGTGACGATTCCGGAACAAGTCGCCATTATGGGATTTGACGATATTCGCCTTGCCAGATACGTCAACCCGTCTTTGTCGACGATTCATCAACCGATGTATGAGTTGGGAATATCTGCCATGAAACAACTCTCCCGCGCCCTGCAGGGGAAAACACTTATTCCCGGCGAGATGCTGCCCGTAAAACTGATTGCGCGCACTTCGACACAAAAAAGGACCACGAAAGTCGGTGAAGAACCTAATGTCTCTTGA
PROTEIN sequence
Length: 345
MATIRDVAHLAQVSVSTVSLVLRQPHRVSPETREKVEKAVQELQYQPNGIARDLRVRKTNTIAVLLHNLSGPFYSELIRGVEEAGENLGFTTLAAGSSKSQDQGSLRLLHEGRVDGAIVLDPTISSPVLLRYARKTLPIVVLDRGLSGTLQSDFITAVGSDHESGGYLAGKHLLTQGYRRFALIAGPVDSEHSHLREVGFFRALQEEPIDVTTIPVVHGDFTEIGGVRAMTMLLDHEWSFDAIFCANDEMAIGAMQVLEERHVTIPEQVAIMGFDDIRLARYVNPSLSTIHQPMYELGISAMKQLSRALQGKTLIPGEMLPVKLIARTSTQKRTTKVGEEPNVS*