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AMDSBA1_7_54 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase, sigma 54 subunit, RpoN/SigL rbh rbh KEGG
DB: KEGG
47.0 438.0 391 4.20e-106 sap:Sulac_1729
RNA polymerase, sigma 54 subunit, RpoN/SigL rbh similarity KEGG
DB: KEGG
47.0 438.0 391 4.20e-106 sap:Sulac_1729
DNA-directed RNA polymerase sigma 54 factor n=2 Tax=Sulfobacillus acidophilus RepID=F8I879_SULAT (db=UNIREF evalue=5.9e-106 bit_score=390.2 identity=47.0 coverage=97.08520179372198) similarity UNIREF
DB: UNIREF
47.0 97.09 390 5.90e-106 sap:Sulac_1729
seg (db=Seg db_id=seg from=221 to=230) iprscan interpro
DB: Seg
null null null null sap:Sulac_1729
SIGMA54_2 (db=PatternScan db_id=PS00718 from=415 to=422 evalue=0.0 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecu iprscan interpro
DB: PatternScan
null null null 0.0 sap:Sulac_1729
rpoN_sigma: RNA polymerase sigma-54 factor (db=HMMTigr db_id=TIGR02395 from=12 to=434 evalue=6.1e-97 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, iprscan interpro
DB: HMMTigr
null null null 6.10e-97 sap:Sulac_1729
(db=HMMPfam db_id=PF04552 from=280 to=435 evalue=5.7e-40 interpro_id=IPR007634 interpro_description=RNA polymerase sigma factor 54, DNA-binding) iprscan interpro
DB: HMMPfam
null null null 5.70e-40 sap:Sulac_1729
(db=HMMPfam db_id=PF04963 from=83 to=266 evalue=6.6e-32 interpro_id=IPR007046 interpro_description=RNA polymerase sigma factor 54, core-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: transcription initiation, DNA-dependent (GO:0006352)) iprscan interpro
DB: HMMPfam
null null null 6.60e-32 sap:Sulac_1729
SIGMA54FCT (db=FPrintScan db_id=PR00045 from=150 to=167 evalue=2.0e-18 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Mo iprscan interpro
DB: FPrintScan
null null null 2.00e-18 sap:Sulac_1729
SIGMA54FCT (db=FPrintScan db_id=PR00045 from=410 to=428 evalue=2.0e-18 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Mo iprscan interpro
DB: FPrintScan
null null null 2.00e-18 sap:Sulac_1729
SIGMA54FCT (db=FPrintScan db_id=PR00045 from=338 to=350 evalue=2.0e-18 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Mo iprscan interpro
DB: FPrintScan
null null null 2.00e-18 sap:Sulac_1729
SIGMA54FCT (db=FPrintScan db_id=PR00045 from=354 to=365 evalue=2.0e-18 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Mo iprscan interpro
DB: FPrintScan
null null null 2.00e-18 sap:Sulac_1729
(db=HMMPfam db_id=PF00309 from=9 to=52 evalue=2.0e-12 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function iprscan interpro
DB: HMMPfam
null null null 2.00e-12 sap:Sulac_1729
SIGMA54_3 (db=ProfileScan db_id=PS50044 from=291 to=414 evalue=21.548 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Mol iprscan interpro
DB: ProfileScan
null null null 2.15e+01 sap:Sulac_1729
Uncharacterized protein {ECO:0000313|EMBL:AEW05225.1}; Flags: Precursor;; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillu UNIPROT
DB: UniProtKB
47.0 438.0 391 2.10e-105 G8TZI5_SULAD