| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| RNA polymerase, sigma 54 subunit, RpoN/SigL rbh | rbh |
KEGG
DB: KEGG |
47.0 | 438.0 | 391 | 4.20e-106 | sap:Sulac_1729 |
| RNA polymerase, sigma 54 subunit, RpoN/SigL rbh | similarity |
KEGG
DB: KEGG |
47.0 | 438.0 | 391 | 4.20e-106 | sap:Sulac_1729 |
| DNA-directed RNA polymerase sigma 54 factor n=2 Tax=Sulfobacillus acidophilus RepID=F8I879_SULAT (db=UNIREF evalue=5.9e-106 bit_score=390.2 identity=47.0 coverage=97.08520179372198) | similarity |
UNIREF
DB: UNIREF |
47.0 | 97.09 | 390 | 5.90e-106 | sap:Sulac_1729 |
| seg (db=Seg db_id=seg from=221 to=230) | iprscan |
interpro
DB: Seg |
null | null | null | null | sap:Sulac_1729 |
| SIGMA54_2 (db=PatternScan db_id=PS00718 from=415 to=422 evalue=0.0 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecu | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | sap:Sulac_1729 |
| rpoN_sigma: RNA polymerase sigma-54 factor (db=HMMTigr db_id=TIGR02395 from=12 to=434 evalue=6.1e-97 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, | iprscan |
interpro
DB: HMMTigr |
null | null | null | 6.10e-97 | sap:Sulac_1729 |
| (db=HMMPfam db_id=PF04552 from=280 to=435 evalue=5.7e-40 interpro_id=IPR007634 interpro_description=RNA polymerase sigma factor 54, DNA-binding) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.70e-40 | sap:Sulac_1729 |
| (db=HMMPfam db_id=PF04963 from=83 to=266 evalue=6.6e-32 interpro_id=IPR007046 interpro_description=RNA polymerase sigma factor 54, core-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: transcription initiation, DNA-dependent (GO:0006352)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 6.60e-32 | sap:Sulac_1729 |
| SIGMA54FCT (db=FPrintScan db_id=PR00045 from=150 to=167 evalue=2.0e-18 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Mo | iprscan |
interpro
DB: FPrintScan |
null | null | null | 2.00e-18 | sap:Sulac_1729 |
| SIGMA54FCT (db=FPrintScan db_id=PR00045 from=410 to=428 evalue=2.0e-18 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Mo | iprscan |
interpro
DB: FPrintScan |
null | null | null | 2.00e-18 | sap:Sulac_1729 |
| SIGMA54FCT (db=FPrintScan db_id=PR00045 from=338 to=350 evalue=2.0e-18 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Mo | iprscan |
interpro
DB: FPrintScan |
null | null | null | 2.00e-18 | sap:Sulac_1729 |
| SIGMA54FCT (db=FPrintScan db_id=PR00045 from=354 to=365 evalue=2.0e-18 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Mo | iprscan |
interpro
DB: FPrintScan |
null | null | null | 2.00e-18 | sap:Sulac_1729 |
| (db=HMMPfam db_id=PF00309 from=9 to=52 evalue=2.0e-12 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.00e-12 | sap:Sulac_1729 |
| SIGMA54_3 (db=ProfileScan db_id=PS50044 from=291 to=414 evalue=21.548 interpro_id=IPR000394 interpro_description=RNA polymerase sigma factor 54 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Mol | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.15e+01 | sap:Sulac_1729 |
| Uncharacterized protein {ECO:0000313|EMBL:AEW05225.1}; Flags: Precursor;; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillu |
UNIPROT
DB: UniProtKB |
47.0 | 438.0 | 391 | 2.10e-105 | G8TZI5_SULAD |