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AMDSBA1_7_63 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
GAF modulated Fis family sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
68.1 656.0 915 9.50e-264 sap:Sulac_1739
Putative transcriptional regulator n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=E2Q2N7_STRC2 (db=UNIREF evalue=2.2e-32 bit_score=146.4 identity=43.2 coverage=27.010622154779966) similarity UNIREF
DB: UNIREF
43.2 27.01 146 2.20e-32 sap:Sulac_1739
seg (db=Seg db_id=seg from=413 to=429) iprscan interpro
DB: Seg
null null null null sap:Sulac_1739
seg (db=Seg db_id=seg from=375 to=386) iprscan interpro
DB: Seg
null null null null sap:Sulac_1739
SIGMA54_INTERACT_1 (db=PatternScan db_id=PS00675 from=374 to=387 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: PatternScan
null null null 0.0 sap:Sulac_1739
SIGMA54_INTERACT_2 (db=PatternScan db_id=PS00676 from=437 to=452 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: PatternScan
null null null 0.0 sap:Sulac_1739
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=349 to=597 evalue=2.8e-67) iprscan interpro
DB: superfamily
null null null 2.80e-67 sap:Sulac_1739
(db=HMMPfam db_id=PF00158 from=350 to=517 evalue=1.6e-65 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: HMMPfam
null null null 1.60e-65 sap:Sulac_1739
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=348 to=523 evalue=4.4e-63) iprscan interpro
DB: Gene3D
null null null 4.40e-63 sap:Sulac_1739
Homeodomain-like (db=superfamily db_id=SSF46689 from=591 to=654 evalue=2.5e-12 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515)) iprscan interpro
DB: superfamily
null null null 2.50e-12 sap:Sulac_1739
no description (db=Gene3D db_id=G3DSA:1.10.8.60 from=524 to=600 evalue=4.8e-12) iprscan interpro
DB: Gene3D
null null null 4.80e-12 sap:Sulac_1739
no description (db=HMMSmart db_id=SM00382 from=370 to=515 evalue=5.3e-12 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111)) iprscan interpro
DB: HMMSmart
null null null 5.30e-12 sap:Sulac_1739
(db=HMMPfam db_id=PF02954 from=614 to=654 evalue=7.3e-11 interpro_id=IPR002197 interpro_description=Helix-turn-helix, Fis-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 7.30e-11 sap:Sulac_1739
SIGMA54_INTERACT_4 (db=ProfileScan db_id=PS50045 from=350 to=580 evalue=59.783 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: ProfileScan
null null null 5.98e+01 sap:Sulac_1739
GAF modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AEJ41328.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. I UNIPROT
DB: UniProtKB
68.1 656.0 915 4.70e-263 F8I869_SULAT
GAF modulated sigma54 specific transcriptional regulator, Fis family n=2 Tax=Sulfobacillus acidophilus RepID=F8I869_SULAT similarity UNIREF
DB: UNIREF90
68.1 null 914 1.40e-263 sap:Sulac_1739