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AMDSBA1_9_22 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG 		86.3 999.99 2077 0.0 say:TPY_0315
rpoB; DNA-directed RNA polymerase subunit beta rbh KEGG
DB: KEGG 		86.3 999.99 2077 0.0 say:TPY_0315
DNA-directed RNA polymerase subunit beta n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=RPOB_ALKMQ (db=UNIREF evalue=0.0 bit_score=1233.0 identity=73.3 coverage=69.43303204601479) similarity UNIREF
DB: UNIREF 		73.3 69.43 1233 0.0 say:TPY_0315
rbh rbh UNIREF
DB: UNIREF 		null null null null say:TPY_0315
seg (db=Seg db_id=seg from=816 to=828) iprscan interpro
DB: Seg 		null null null null say:TPY_0315
seg (db=Seg db_id=seg from=1109 to=1125) iprscan interpro
DB: Seg 		null null null null say:TPY_0315
seg (db=Seg db_id=seg from=1192 to=1215) iprscan interpro
DB: Seg 		null null null null say:TPY_0315
rpoB: DNA-directed RNA polymerase, beta subu (db=HMMTigr db_id=TIGR02013 from=8 to=1109 evalue=0.0 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		null null null 0.0 say:TPY_0315
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=2 to=1117 evalue=0.0) iprscan interpro
DB: superfamily 		null null null 0.0 say:TPY_0315
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR20856:SF3 from=418 to=1131 evalue=0.0 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPanther 		null null null 0.0 say:TPY_0315
DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 (db=HMMPanther db_id=PTHR20856 from=418 to=1131 evalue=0.0 interpro_id=IPR015712 interpro_description=DNA-directed RNA polymerase, subunit 2 GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: ribonucleoside binding (GO:0032549)) iprscan interpro
DB: HMMPanther 		null null null 0.0 say:TPY_0315
RNA_POL_BETA (db=PatternScan db_id=PS01166 from=887 to=899 evalue=0.0 interpro_id=IPR007121 interpro_description=RNA polymerase, beta subunit, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: PatternScan 		null null null 0.0 say:TPY_0315
(db=HMMPfam db_id=PF00562 from=648 to=1034 evalue=6.4e-170 interpro_id=IPR007120 interpro_description=DNA-directed RNA polymerase, subunit 2, domain 6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 6.40e-170 say:TPY_0315
no description (db=Gene3D db_id=G3DSA:3.90.1100.10 from=10 to=645 evalue=4.1e-135) iprscan interpro
DB: Gene3D 		null null null 4.10e-135 say:TPY_0315
no description (db=Gene3D db_id=G3DSA:2.40.270.10 from=658 to=1020 evalue=6.5e-76 interpro_id=IPR007120 interpro_description=DNA-directed RNA polymerase, subunit 2, domain 6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: Gene3D 		null null null 6.50e-76 say:TPY_0315
(db=HMMPfam db_id=PF04563 from=26 to=438 evalue=2.6e-36 interpro_id=IPR007644 interpro_description=RNA polymerase, beta subunit, protrusion GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 2.60e-36 say:TPY_0315
(db=HMMPfam db_id=PF04560 from=1036 to=1111 evalue=1.0e-30 interpro_id=IPR007641 interpro_description=RNA polymerase Rpb2, domain 7 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 1.00e-30 say:TPY_0315
(db=HMMPfam db_id=PF04565 from=442 to=511 evalue=5.2e-29 interpro_id=IPR007645 interpro_description=RNA polymerase Rpb2, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 5.20e-29 say:TPY_0315
(db=HMMPfam db_id=PF04561 from=138 to=280 evalue=9.8e-26 interpro_id=IPR007642 interpro_description=RNA polymerase Rpb2, domain 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 9.80e-26 say:TPY_0315
(db=HMMPfam db_id=PF10385 from=520 to=587 evalue=1.5e-24 interpro_id=IPR019462 interpro_description=DNA-directed RNA polymerase, beta subunit, external 1 domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 1.50e-24 say:TPY_0315
(db=HMMPfam db_id=PF04561 from=349 to=383 evalue=1.1e-05 interpro_id=IPR007642 interpro_description=RNA polymerase Rpb2, domain 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 1.10e-05 say:TPY_0315
RNApol_bact_RpoB (db=HAMAP db_id=MF_01321 from=13 to=1112 evalue=12.744 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP 		null null null 1.27e+01 say:TPY_0315
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su UNIPROT
DB: UniProtKB 		86.3 999.99 2077 0.0 F8I5M6_SULAT