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AMDSBA1_9_23 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
87.8 999.99 2020 0.0 sap:Sulac_0280
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) rbh KEGG
DB: KEGG
87.8 999.99 2020 0.0 sap:Sulac_0280
DNA-directed RNA polymerase subunit gamma n=3 Tax=Cyanobacteria RepID=RPOC1_ACAM1 (db=UNIREF evalue=8.4e-213 bit_score=746.5 identity=65.4 coverage=46.373056994818654) similarity UNIREF
DB: UNIREF
65.4 46.37 746 8.40e-213 sap:Sulac_0280
rbh rbh UNIREF
DB: UNIREF
null null null null sap:Sulac_0280
seg (db=Seg db_id=seg from=178 to=191) iprscan interpro
DB: Seg
null null null null sap:Sulac_0280
seg (db=Seg db_id=seg from=259 to=272) iprscan interpro
DB: Seg
null null null null sap:Sulac_0280
seg (db=Seg db_id=seg from=865 to=879) iprscan interpro
DB: Seg
null null null null sap:Sulac_0280
seg (db=Seg db_id=seg from=1024 to=1035) iprscan interpro
DB: Seg
null null null null sap:Sulac_0280
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=1 to=1135 evalue=0.0) iprscan interpro
DB: superfamily
null null null 0.0 sap:Sulac_0280
rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=9 to=1137 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr
null null null 0.0 sap:Sulac_0280
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=4 to=1145 evalue=0.0) iprscan interpro
DB: HMMPanther
null null null 0.0 sap:Sulac_0280
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=4 to=1145 evalue=0.0) iprscan interpro
DB: HMMPanther
null null null 0.0 sap:Sulac_0280
no description (db=HMMSmart db_id=SM00663 from=224 to=503 evalue=3.8e-185 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMSmart
null null null 3.80e-185 sap:Sulac_0280
no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=3 to=334 evalue=4.4e-127) iprscan interpro
DB: Gene3D
null null null 4.40e-127 sap:Sulac_0280
(db=HMMPfam db_id=PF04997 from=7 to=331 evalue=3.0e-99 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 3.00e-99 sap:Sulac_0280
(db=HMMPfam db_id=PF04998 from=725 to=1090 evalue=1.7e-76 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 1.70e-76 sap:Sulac_0280
(db=HMMPfam db_id=PF00623 from=333 to=474 evalue=2.3e-51 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 2.30e-51 sap:Sulac_0280
no description (db=Gene3D db_id=G3DSA:2.40.40.30 from=335 to=477 evalue=8.0e-32) iprscan interpro
DB: Gene3D
null null null 8.00e-32 sap:Sulac_0280
(db=HMMPfam db_id=PF04983 from=478 to=618 evalue=4.9e-25 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 4.90e-25 sap:Sulac_0280
(db=HMMPfam db_id=PF05000 from=647 to=714 evalue=9.0e-15 interpro_id=IPR007083 interpro_description=RNA polymerase Rpb1, domain 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
null null null 9.00e-15 sap:Sulac_0280
RNApol_bact_RpoC (db=HAMAP db_id=MF_01322 from=5 to=1145 evalue=10.41 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP
null null null 1.04e+01 sap:Sulac_0280
RNApol_bact_RpoC1 (db=HAMAP db_id=MF_01323 from=3 to=658 evalue=32.708) iprscan interpro
DB: HAMAP
null null null 3.27e+01 sap:Sulac_0280
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
87.8 999.99 2020 0.0 F8I5M7_SULAT