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This organism can only be binned in the context of its binning project GWB1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

AMDSBA1_23_3 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
dnaE; DNA polymerase III subunit alpha similarity KEGG
DB: KEGG
60.6 999.99 1215 0.0 say:TPY_2605
dnaE; DNA polymerase III subunit alpha rbh KEGG
DB: KEGG
60.6 999.99 1215 0.0 say:TPY_2605
DNA polymerase III, alpha subunit n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=E4M170_9FIRM (db=UNIREF evalue=1.0e-233 bit_score=815.8 identity=47.8 coverage=89.46859903381642) similarity UNIREF
DB: UNIREF
47.8 89.47 815 1.00e-233 say:TPY_2605
rbh rbh UNIREF
DB: UNIREF
null null null null say:TPY_2605
seg (db=Seg db_id=seg from=534 to=544) iprscan interpro
DB: Seg
null null null null say:TPY_2605
seg (db=Seg db_id=seg from=734 to=749) iprscan interpro
DB: Seg
null null null null say:TPY_2605
polc: DNA polymerase III, alpha subunit (db=HMMTigr db_id=TIGR00594 from=8 to=976 evalue=9.3e-227 interpro_id=IPR004805 interpro_description=DNA polymerase III, alpha subunit GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408)) iprscan interpro
DB: HMMTigr
null null null 9.30e-227 say:TPY_2605
(db=HMMPfam db_id=PF07733 from=288 to=709 evalue=6.1e-143 interpro_id=IPR011708 interpro_description=Bacterial DNA polymerase III, alpha subunit GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408)) iprscan interpro
DB: HMMPfam
null null null 6.10e-143 say:TPY_2605
(db=HMMPfam db_id=PF02811 from=10 to=172 evalue=1.1e-18 interpro_id=IPR004013 interpro_description=PHP, C-terminal GO=Molecular Function: catalytic activity (GO:0003824)) iprscan interpro
DB: HMMPfam
null null null 1.10e-18 say:TPY_2605
PHP domain-like (db=superfamily db_id=SSF89550 from=7 to=260 evalue=1.7e-18 interpro_id=IPR016195 interpro_description=Polymerase/histidinol phosphatase-like GO=Molecular Function: catalytic activity (GO:0003824)) iprscan interpro
DB: superfamily
null null null 1.70e-18 say:TPY_2605
no description (db=HMMSmart db_id=SM00481 from=9 to=76 evalue=9.9e-17 interpro_id=IPR003141 interpro_description=Polymerase/histidinol phosphatase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260)) iprscan interpro
DB: HMMSmart
null null null 9.90e-17 say:TPY_2605
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XV UNIPROT
DB: UniProtKB
60.6 999.99 1215 0.0 G8TVS5_SULAD